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A new dipolarophile used in the construction of bioactive heterocycles, (
Z)-3-(3,4-dimethoxyphenyl)-2-(4-methoxyphenyl)acrylonitrile, C
18H
17NO
3, has been synthesized by base-catalysed reaction of 3,4-dimethoxybenzaldehyde with (4-methoxyphenyl)acetonitrile. The olefinic bond has
Z geometry and the molecules are linked by C—H
O and C—H
N hydrogen bonds.
Supporting information
CCDC reference: 292107
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.004 Å
- R factor = 0.054
- wR factor = 0.168
- Data-to-parameter ratio = 12.6
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full Low ....... 0.96
Alert level C
PLAT230_ALERT_2_C Hirshfeld Test Diff for C9 - C10 .. 6.27 su
PLAT371_ALERT_2_C Long C(sp2)-C(sp1) Bond C9 - C10 ... 1.44 Ang.
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
2 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: XPRESS (MacScience, 2002); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski and Minor, 1997) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003) and ORTEPII (Johnson, 1976); software used to prepare material for publication: PLATON.
(
Z)-3-(3,4-dimethoxyphenyl)-2-(4-methoxyphenyl)acrylonitrile
top
Crystal data top
C18H17NO3 | F(000) = 624 |
Mr = 295.33 | Dx = 1.299 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4731 reflections |
a = 14.830 (9) Å | θ = 3.1–25.0° |
b = 13.688 (7) Å | µ = 0.09 mm−1 |
c = 7.445 (16) Å | T = 295 K |
β = 91.724 (2)° | Block, pale yellow |
V = 1511 (3) Å3 | 0.25 × 0.20 × 0.20 mm |
Z = 4 | |
Data collection top
MacScience DIPLabo 32001 diffractometer | 1955 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.019 |
Graphite monochromator | θmax = 25.0°, θmin = 3.1° |
Detector resolution: 10.0 pixels mm-1 | h = −17→17 |
ω scans | k = −15→14 |
4731 measured reflections | l = −8→8 |
2549 independent reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.054 | H-atom parameters constrained |
wR(F2) = 0.168 | w = 1/[σ2(Fo2) + (0.1039P)2 + 0.2197P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
2549 reflections | Δρmax = 0.20 e Å−3 |
203 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Extinction correction: SHELXL97 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.042 (7) |
Special details top
Experimental. 1H NMR (CDCl3): δ 3.72 (s, 9H, O–CH3), 6.79 (s, 2H,
Ar–H), 7.4–7.55 (dd, 2H, Ar–H), 7.42 (s, 1H, CH═CH–Ar),
6.78–6.9 (dd, 2H, Ar–H). |
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Refinement. Refinement on F^2 for ALL reflections except those flagged by the user
for potential systematic errors. Weighted R-factors wR and all
goodnesses of fit S are based on F^2, conventional
R-factors R are based on F, with F set to zero for
negative F^2. The observed criterion of F^2 > σ(F^2)
is used only for calculating -R-factor-obs etc. and is not
relevant to the choice of reflections for refinement. R-factors based
on F^2 are statistically about twice as large as those based on
F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O7 | 0.12092 (10) | 0.71841 (12) | 0.4352 (2) | 0.0760 (6) | |
O19 | 0.83848 (10) | 0.71793 (11) | 0.1178 (3) | 0.0777 (6) | |
O21 | 0.90122 (10) | 0.54153 (11) | 0.1466 (2) | 0.0770 (6) | |
N11 | 0.45805 (15) | 0.37026 (16) | 0.2334 (4) | 0.0932 (10) | |
C1 | 0.27875 (14) | 0.72289 (15) | 0.4470 (3) | 0.0614 (7) | |
C2 | 0.20035 (13) | 0.67562 (15) | 0.3877 (3) | 0.0600 (7) | |
C3 | 0.20679 (14) | 0.58931 (15) | 0.2922 (3) | 0.0633 (8) | |
C4 | 0.29052 (14) | 0.55224 (14) | 0.2559 (3) | 0.0603 (7) | |
C5 | 0.36973 (13) | 0.59872 (14) | 0.3106 (3) | 0.0563 (7) | |
C6 | 0.36176 (14) | 0.68589 (15) | 0.4089 (3) | 0.0609 (7) | |
C8 | 0.03933 (15) | 0.6837 (2) | 0.3529 (4) | 0.0833 (10) | |
C9 | 0.45922 (13) | 0.55837 (14) | 0.2701 (3) | 0.0572 (7) | |
C10 | 0.46110 (15) | 0.45365 (17) | 0.2486 (3) | 0.0671 (8) | |
C12 | 0.53402 (14) | 0.61321 (15) | 0.2537 (3) | 0.0624 (7) | |
C13 | 0.62752 (14) | 0.58760 (15) | 0.2253 (3) | 0.0593 (7) | |
C14 | 0.66327 (15) | 0.49374 (15) | 0.2418 (3) | 0.0660 (8) | |
C15 | 0.75348 (15) | 0.47681 (16) | 0.2163 (3) | 0.0649 (8) | |
C16 | 0.81094 (14) | 0.55229 (14) | 0.1739 (3) | 0.0601 (7) | |
C17 | 0.77666 (14) | 0.64765 (14) | 0.1577 (3) | 0.0602 (7) | |
C18 | 0.68688 (13) | 0.66369 (15) | 0.1838 (3) | 0.0612 (7) | |
C20 | 0.81115 (16) | 0.81736 (15) | 0.1366 (4) | 0.0778 (10) | |
C22 | 0.93850 (17) | 0.44663 (19) | 0.1746 (4) | 0.0889 (10) | |
H1 | 0.27470 | 0.78030 | 0.51320 | 0.0740* | |
H3 | 0.15490 | 0.55660 | 0.25290 | 0.0760* | |
H4 | 0.29410 | 0.49390 | 0.19230 | 0.0720* | |
H6 | 0.41350 | 0.71880 | 0.44850 | 0.0730* | |
H8A | 0.04360 | 0.68670 | 0.22470 | 0.1250* | |
H8B | −0.01000 | 0.72360 | 0.38970 | 0.1250* | |
H8C | 0.02930 | 0.61730 | 0.38890 | 0.1250* | |
H12 | 0.52380 | 0.68010 | 0.26220 | 0.0750* | |
H14 | 0.62570 | 0.44190 | 0.27030 | 0.0790* | |
H15 | 0.77610 | 0.41370 | 0.22780 | 0.0780* | |
H18 | 0.66450 | 0.72700 | 0.17390 | 0.0730* | |
H20A | 0.76060 | 0.83030 | 0.05650 | 0.1170* | |
H20B | 0.86030 | 0.85970 | 0.10780 | 0.1170* | |
H20C | 0.79420 | 0.82900 | 0.25820 | 0.1170* | |
H22A | 0.92980 | 0.42680 | 0.29650 | 0.1330* | |
H22B | 1.00180 | 0.44800 | 0.15170 | 0.1330* | |
H22C | 0.90890 | 0.40110 | 0.09440 | 0.1330* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O7 | 0.0541 (9) | 0.0844 (11) | 0.0898 (12) | 0.0003 (7) | 0.0049 (8) | −0.0097 (8) |
O19 | 0.0617 (10) | 0.0600 (9) | 0.1120 (14) | −0.0068 (7) | 0.0127 (8) | −0.0030 (8) |
O21 | 0.0561 (9) | 0.0685 (10) | 0.1067 (13) | 0.0057 (7) | 0.0061 (8) | −0.0033 (8) |
N11 | 0.0857 (15) | 0.0606 (15) | 0.133 (2) | −0.0012 (10) | −0.0020 (13) | −0.0107 (11) |
C1 | 0.0602 (13) | 0.0615 (12) | 0.0625 (13) | −0.0022 (9) | 0.0024 (9) | −0.0057 (9) |
C2 | 0.0523 (12) | 0.0669 (13) | 0.0611 (13) | −0.0011 (9) | 0.0047 (9) | 0.0047 (9) |
C3 | 0.0603 (13) | 0.0628 (12) | 0.0666 (14) | −0.0091 (9) | −0.0035 (9) | 0.0009 (9) |
C4 | 0.0636 (13) | 0.0554 (12) | 0.0616 (13) | −0.0064 (8) | −0.0014 (9) | −0.0005 (8) |
C5 | 0.0575 (12) | 0.0553 (11) | 0.0562 (12) | −0.0035 (8) | 0.0021 (8) | 0.0036 (8) |
C6 | 0.0588 (12) | 0.0630 (12) | 0.0608 (13) | −0.0077 (9) | −0.0004 (9) | −0.0012 (9) |
C8 | 0.0557 (14) | 0.1024 (19) | 0.0918 (19) | −0.0070 (12) | 0.0014 (12) | −0.0013 (14) |
C9 | 0.0593 (12) | 0.0519 (12) | 0.0603 (13) | −0.0003 (8) | 0.0014 (9) | 0.0011 (8) |
C10 | 0.0598 (13) | 0.0641 (15) | 0.0772 (15) | −0.0004 (9) | 0.0004 (10) | −0.0005 (10) |
C12 | 0.0595 (12) | 0.0597 (12) | 0.0682 (14) | 0.0002 (9) | 0.0047 (9) | 0.0059 (9) |
C13 | 0.0567 (12) | 0.0598 (12) | 0.0614 (13) | 0.0005 (8) | 0.0040 (9) | 0.0021 (8) |
C14 | 0.0621 (13) | 0.0627 (13) | 0.0734 (14) | −0.0014 (9) | 0.0061 (10) | 0.0079 (10) |
C15 | 0.0644 (13) | 0.0603 (12) | 0.0699 (14) | 0.0038 (9) | 0.0002 (10) | 0.0027 (9) |
C16 | 0.0553 (12) | 0.0631 (12) | 0.0617 (13) | 0.0018 (8) | 0.0006 (9) | −0.0039 (9) |
C17 | 0.0578 (12) | 0.0594 (12) | 0.0636 (13) | −0.0036 (9) | 0.0027 (9) | −0.0020 (9) |
C18 | 0.0584 (12) | 0.0565 (12) | 0.0686 (14) | −0.0011 (8) | 0.0019 (9) | 0.0009 (9) |
C20 | 0.0786 (16) | 0.0581 (14) | 0.0970 (19) | −0.0056 (10) | 0.0073 (13) | 0.0016 (11) |
C22 | 0.0694 (16) | 0.0804 (17) | 0.117 (2) | 0.0174 (12) | 0.0063 (14) | 0.0057 (14) |
Geometric parameters (Å, º) top
O7—C2 | 1.371 (4) | C15—C16 | 1.382 (4) |
O7—C8 | 1.421 (4) | C16—C17 | 1.405 (4) |
O19—C17 | 1.368 (4) | C17—C18 | 1.369 (4) |
O19—C20 | 1.428 (4) | C1—H1 | 0.9305 |
O21—C16 | 1.368 (4) | C3—H3 | 0.9299 |
O21—C22 | 1.425 (4) | C4—H4 | 0.9307 |
N11—C10 | 1.148 (4) | C6—H6 | 0.9300 |
C1—C2 | 1.391 (4) | C8—H8A | 0.9593 |
C1—C6 | 1.369 (4) | C8—H8B | 0.9595 |
C2—C3 | 1.384 (4) | C8—H8C | 0.9604 |
C3—C4 | 1.376 (4) | C12—H12 | 0.9305 |
C4—C5 | 1.386 (4) | C14—H14 | 0.9306 |
C5—C6 | 1.407 (4) | C15—H15 | 0.9297 |
C5—C9 | 1.477 (4) | C18—H18 | 0.9301 |
C9—C10 | 1.443 (4) | C20—H20A | 0.9603 |
C9—C12 | 1.348 (4) | C20—H20B | 0.9605 |
C12—C13 | 1.452 (4) | C20—H20C | 0.9601 |
C13—C14 | 1.394 (4) | C22—H22A | 0.9597 |
C13—C18 | 1.404 (4) | C22—H22B | 0.9593 |
C14—C15 | 1.377 (4) | C22—H22C | 0.9601 |
| | | |
O7···C22i | 3.341 (8) | H3···C8 | 2.5681 |
O19···O21 | 2.594 (6) | H3···H8A | 2.4329 |
O21···O19 | 2.594 (6) | H3···H8C | 2.3018 |
O21···C8ii | 3.186 (7) | H4···C10 | 2.5594 |
O7···H22Ci | 2.5479 | H6···C12 | 2.7464 |
O7···H8Aiii | 2.7921 | H6···H12 | 2.2398 |
O19···H20Civ | 2.8117 | H8A···C3 | 2.7952 |
O21···H8Cii | 2.7805 | H8A···H3 | 2.4329 |
O21···H22Bv | 2.6858 | H8A···O7iv | 2.7921 |
N11···H14 | 2.6791 | H8C···O21viii | 2.7805 |
N11···H12vi | 2.6169 | H8C···C3 | 2.7762 |
N11···H18vi | 2.7749 | H8C···H3 | 2.3018 |
C4···C15vii | 3.578 (8) | H8C···H22Aix | 2.4764 |
C8···O21viii | 3.186 (7) | H12···C6 | 2.6705 |
C10···C14 | 3.050 (7) | H12···H6 | 2.2398 |
C14···C10 | 3.050 (7) | H12···H18 | 2.2980 |
C15···C4vii | 3.578 (8) | H12···N11i | 2.6169 |
C22···O7vi | 3.341 (8) | H14···N11 | 2.6791 |
C22···C22v | 3.536 (9) | H14···C9 | 2.9389 |
C1···H15i | 3.0188 | H14···C10 | 2.4468 |
C2···H1iv | 3.0885 | H14···C6ix | 2.9617 |
C3···H1iv | 2.9394 | H15···C22 | 2.4936 |
C3···H8C | 2.7762 | H15···H22A | 2.3279 |
C3···H8A | 2.7952 | H15···H22C | 2.2388 |
C4···H1iv | 2.9238 | H15···C1vi | 3.0188 |
C5···H1iv | 3.0730 | H18···C20 | 2.5245 |
C6···H14ix | 2.9617 | H18···H12 | 2.2980 |
C6···H12 | 2.6705 | H18···H20A | 2.2066 |
C8···H3 | 2.5681 | H18···H20C | 2.4434 |
C8···H22Aix | 3.0395 | H18···N11i | 2.7749 |
C8···H22Ci | 3.0952 | H20A···C18 | 2.7123 |
C9···H14 | 2.9389 | H20A···H18 | 2.2066 |
C10···H4 | 2.5594 | H20A···C17iv | 3.0010 |
C10···H14 | 2.4468 | H20A···C18iv | 2.9527 |
C12···H6 | 2.7464 | H20C···C18 | 2.8119 |
C15···H22A | 2.7511 | H20C···H18 | 2.4434 |
C15···H22C | 2.7085 | H20C···O19iii | 2.8117 |
C17···H20Civ | 3.0104 | H20C···C17iii | 3.0104 |
C17···H20Aiii | 3.0010 | H22A···C15 | 2.7511 |
C18···H20C | 2.8119 | H22A···H15 | 2.3279 |
C18···H20A | 2.7123 | H22A···C8ix | 3.0395 |
C18···H20Aiii | 2.9527 | H22A···H8Cix | 2.4764 |
C20···H18 | 2.5245 | H22B···O21v | 2.6858 |
C22···H15 | 2.4936 | H22B···C22v | 2.9825 |
C22···H22Bv | 2.9825 | H22C···C15 | 2.7085 |
H1···C2iii | 3.0885 | H22C···H15 | 2.2388 |
H1···C3iii | 2.9394 | H22C···O7vi | 2.5479 |
H1···C4iii | 2.9238 | H22C···C8vi | 3.0952 |
H1···C5iii | 3.0730 | | |
| | | |
C2—O7—C8 | 118.21 (18) | C2—C3—H3 | 120.23 |
C17—O19—C20 | 117.06 (17) | C4—C3—H3 | 120.26 |
C16—O21—C22 | 116.98 (17) | C3—C4—H4 | 118.82 |
C2—C1—C6 | 120.7 (2) | C5—C4—H4 | 118.84 |
O7—C2—C1 | 115.83 (18) | C1—C6—H6 | 119.58 |
O7—C2—C3 | 124.77 (18) | C5—C6—H6 | 119.63 |
C1—C2—C3 | 119.36 (19) | O7—C8—H8A | 109.50 |
C2—C3—C4 | 119.51 (19) | O7—C8—H8B | 109.46 |
C3—C4—C5 | 122.34 (19) | O7—C8—H8C | 109.45 |
C4—C5—C6 | 117.29 (18) | H8A—C8—H8B | 109.48 |
C4—C5—C9 | 121.81 (18) | H8A—C8—H8C | 109.49 |
C6—C5—C9 | 120.90 (18) | H8B—C8—H8C | 109.46 |
C1—C6—C5 | 120.79 (19) | C9—C12—H12 | 113.93 |
C5—C9—C10 | 114.50 (17) | C13—C12—H12 | 113.94 |
C5—C9—C12 | 123.86 (18) | C13—C14—H14 | 119.61 |
C10—C9—C12 | 121.64 (19) | C15—C14—H14 | 119.61 |
N11—C10—C9 | 176.5 (2) | C14—C15—H15 | 119.55 |
C9—C12—C13 | 132.13 (19) | C16—C15—H15 | 119.50 |
C12—C13—C14 | 124.90 (19) | C13—C18—H18 | 118.94 |
C12—C13—C18 | 117.44 (18) | C17—C18—H18 | 118.97 |
C14—C13—C18 | 117.63 (19) | O19—C20—H20A | 109.48 |
C13—C14—C15 | 120.8 (2) | O19—C20—H20B | 109.49 |
C14—C15—C16 | 120.9 (2) | O19—C20—H20C | 109.49 |
O21—C16—C15 | 124.50 (18) | H20A—C20—H20B | 109.49 |
O21—C16—C17 | 116.14 (17) | H20A—C20—H20C | 109.47 |
C15—C16—C17 | 119.36 (19) | H20B—C20—H20C | 109.41 |
O19—C17—C16 | 115.41 (18) | O21—C22—H22A | 109.49 |
O19—C17—C18 | 125.39 (18) | O21—C22—H22B | 109.49 |
C16—C17—C18 | 119.20 (19) | O21—C22—H22C | 109.43 |
C13—C18—C17 | 122.08 (19) | H22A—C22—H22B | 109.49 |
C2—C1—H1 | 119.63 | H22A—C22—H22C | 109.42 |
C6—C1—H1 | 119.67 | H22B—C22—H22C | 109.49 |
| | | |
C8—O7—C2—C1 | 169.1 (2) | C4—C5—C6—C1 | −0.4 (3) |
C8—O7—C2—C3 | −13.0 (3) | C10—C9—C12—C13 | −4.2 (4) |
C20—O19—C17—C16 | −167.4 (2) | C5—C9—C12—C13 | 175.9 (2) |
C20—O19—C17—C18 | 11.9 (4) | C9—C12—C13—C14 | −12.7 (4) |
C22—O21—C16—C17 | 175.8 (2) | C9—C12—C13—C18 | 169.4 (2) |
C22—O21—C16—C15 | −3.8 (3) | C18—C13—C14—C15 | −0.6 (3) |
C6—C1—C2—O7 | 179.3 (2) | C14—C13—C18—C17 | 0.8 (3) |
C6—C1—C2—C3 | 1.2 (3) | C12—C13—C18—C17 | 178.8 (2) |
C2—C1—C6—C5 | −0.7 (3) | C12—C13—C14—C15 | −178.5 (2) |
O7—C2—C3—C4 | −178.5 (2) | C13—C14—C15—C16 | 0.1 (3) |
C1—C2—C3—C4 | −0.7 (3) | C14—C15—C16—O21 | 180.0 (2) |
C2—C3—C4—C5 | −0.5 (3) | C14—C15—C16—C17 | 0.4 (3) |
C3—C4—C5—C6 | 1.0 (3) | O21—C16—C17—C18 | −179.8 (2) |
C3—C4—C5—C9 | −179.7 (2) | C15—C16—C17—O19 | 179.2 (2) |
C6—C5—C9—C10 | 152.1 (2) | O21—C16—C17—O19 | −0.5 (3) |
C4—C5—C9—C10 | −27.1 (3) | C15—C16—C17—C18 | −0.2 (3) |
C6—C5—C9—C12 | −28.0 (3) | O19—C17—C18—C13 | −179.7 (2) |
C9—C5—C6—C1 | −179.7 (2) | C16—C17—C18—C13 | −0.4 (3) |
C4—C5—C9—C12 | 152.8 (2) | | |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) x+1, y, z; (iii) x, −y+3/2, z+1/2; (iv) x, −y+3/2, z−1/2; (v) −x+2, −y+1, −z; (vi) −x+1, y−1/2, −z+1/2; (vii) −x+1, −y+1, −z; (viii) x−1, y, z; (ix) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12···N11i | 0.93 | 2.62 | 3.522 (8) | 164 |
C22—H22C···O7vi | 0.96 | 2.55 | 3.341 (8) | 140 |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (vi) −x+1, y−1/2, −z+1/2. |
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