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The tetra­dentate Schiff base carboxyl­ate-containing ligand bis­(2-pyridylmeth­yl)amino-6-caproic acid (Hpmca) reacts with zinc(II) perchlorate to give the title one-dimensional zinc(II) complex, {[Zn(C18H22N3O2)(H2O)](ClO4)}n or {[Zn(μ-pmca)(H2O)](ClO4)}n. Each ZnII ion has a distorted octa­hedral geometry, being coordinated by three N atoms of the ligand, two O atoms belonging to another ligand, and one water mol­ecule.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805035026/ac6211sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536805035026/ac6211Isup2.hkl
Contains datablock I

CCDC reference: 293805

Key indicators

  • Single-crystal X-ray study
  • T = 234 K
  • Mean [sigma](C-C) = 0.006 Å
  • R factor = 0.041
  • wR factor = 0.127
  • Data-to-parameter ratio = 18.4

checkCIF/PLATON results

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Alert level C PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors for Cl1 PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 1
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion
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Computing details top

Data collection: SMART (Bruker, 1999); cell refinement: SMART (Bruker, 1999); data reduction: SAINT-Plus (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.

catena-Poly[[Aqua[bis(2-pyridylmethyl)amino-6-caproato]zinc(II) perchlorate] top
Crystal data top
[Zn(C18H22N3O2)(H2O)](ClO4)F(000) = 2048
Mr = 495.22Dx = 1.603 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 4492 reflections
a = 15.9996 (7) Åθ = 2.6–23.1°
b = 15.3187 (6) ŵ = 1.37 mm1
c = 16.7417 (7) ÅT = 234 K
V = 4103.3 (3) Å3Block, colourless
Z = 80.31 × 0.18 × 0.13 mm
Data collection top
Bruker SMART 1000 CCD area-detector
diffractometer
5109 independent reflections
Radiation source: fine-focus sealed tube3087 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.055
ω scansθmax = 28.3°, θmin = 2.2°
Absorption correction: multi-scan
SADABS (Sheldrick, 1996)
h = 2119
Tmin = 0.646, Tmax = 0.840k = 2012
28748 measured reflectionsl = 2122
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.127H atoms treated by a mixture of independent and constrained refinement
S = 1.03 w = 1/[σ2(Fo2) + (0.0446P)2 + 6.9671P]
where P = (Fo2 + 2Fc2)/3
5109 reflections(Δ/σ)max < 0.001
277 parametersΔρmax = 0.55 e Å3
0 restraintsΔρmin = 0.39 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Zn0.01668 (3)0.45775 (2)0.35349 (2)0.03238 (12)
Cl10.30246 (7)0.40472 (7)0.53505 (6)0.0536 (3)
O10.01237 (16)0.38347 (15)0.45502 (13)0.0379 (6)
O20.04708 (17)0.32496 (17)0.34124 (13)0.0429 (6)
O30.3419 (3)0.4593 (3)0.4783 (3)0.1016 (13)
O40.2452 (3)0.3500 (3)0.4968 (2)0.1002 (13)
O50.3653 (2)0.3565 (3)0.5763 (3)0.0928 (12)
O60.2593 (2)0.4582 (3)0.5897 (2)0.1038 (15)
OW10.0840 (2)0.55871 (19)0.41010 (17)0.0461 (7)
H19A0.064 (3)0.578 (3)0.446 (3)0.055*
H19B0.134 (3)0.557 (3)0.415 (3)0.055*
N10.08408 (19)0.54498 (19)0.35616 (17)0.0380 (7)
N20.0318 (2)0.52091 (19)0.23721 (16)0.0385 (7)
N30.13118 (19)0.40398 (19)0.32071 (17)0.0374 (7)
C10.1456 (3)0.5483 (3)0.4094 (2)0.0475 (9)
H10.15190.50160.44450.057*
C20.2006 (3)0.6171 (3)0.4155 (3)0.0551 (11)
H20.24280.61710.45370.066*
C30.1913 (3)0.6857 (3)0.3634 (3)0.0642 (13)
H30.22750.73320.36580.077*
C40.1288 (3)0.6838 (3)0.3083 (3)0.0608 (12)
H40.12230.72960.27240.073*
C50.0750 (3)0.6135 (2)0.3060 (2)0.0450 (9)
C60.0011 (3)0.6123 (2)0.2525 (2)0.0488 (10)
H6A0.01270.63970.20190.059*
H6B0.04540.64610.27720.059*
C70.1227 (3)0.5186 (3)0.2205 (2)0.0490 (10)
H7A0.14820.57120.24150.059*
H7B0.13120.51820.16320.059*
C80.1660 (2)0.4402 (2)0.2563 (2)0.0435 (9)
C90.2415 (3)0.4090 (3)0.2266 (3)0.0580 (11)
H90.26400.43230.18000.070*
C100.2822 (3)0.3442 (3)0.2663 (3)0.0609 (12)
H100.33360.32430.24790.073*
C110.2466 (3)0.3076 (3)0.3345 (3)0.0556 (11)
H110.27310.26310.36250.067*
C120.1708 (2)0.3402 (3)0.3585 (2)0.0448 (9)
H120.14590.31620.40370.054*
C130.0419 (2)0.3197 (2)0.41514 (19)0.0338 (7)
C140.0688 (2)0.2380 (2)0.45814 (19)0.0367 (8)
H14A0.05760.18840.42370.044*
H14B0.12870.24060.46650.044*
C150.0269 (2)0.2217 (2)0.5383 (2)0.0395 (8)
H15A0.03300.22930.53270.047*
H15B0.04680.26430.57670.047*
C160.0450 (2)0.1305 (2)0.5692 (2)0.0387 (8)
H16A0.02930.08850.52860.046*
H16B0.10460.12480.57820.046*
C170.0011 (2)0.1083 (2)0.6466 (2)0.0397 (8)
H17A0.06080.11580.63910.048*
H17B0.01680.14740.68890.048*
C180.0175 (3)0.4852 (2)0.1699 (2)0.0416 (9)
H18A0.00820.52200.12350.050*
H18B0.07630.48940.18350.050*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Zn0.0405 (2)0.0313 (2)0.02534 (19)0.00151 (17)0.00170 (17)0.00090 (16)
Cl10.0480 (6)0.0581 (6)0.0545 (6)0.0027 (5)0.0035 (5)0.0098 (5)
O10.0503 (15)0.0352 (13)0.0283 (11)0.0044 (11)0.0022 (11)0.0010 (10)
O20.0538 (16)0.0472 (15)0.0278 (12)0.0059 (12)0.0051 (11)0.0057 (11)
O30.106 (3)0.106 (3)0.092 (3)0.018 (3)0.014 (2)0.030 (2)
O40.090 (3)0.106 (3)0.104 (3)0.024 (2)0.011 (2)0.042 (3)
O50.083 (3)0.082 (3)0.113 (3)0.015 (2)0.017 (2)0.016 (2)
O60.065 (2)0.145 (4)0.102 (3)0.013 (2)0.011 (2)0.066 (3)
OW10.0466 (17)0.0514 (17)0.0402 (15)0.0049 (14)0.0009 (13)0.0151 (12)
N10.0422 (17)0.0382 (15)0.0336 (14)0.0021 (13)0.0019 (13)0.0001 (13)
N20.054 (2)0.0344 (16)0.0270 (14)0.0072 (13)0.0024 (13)0.0024 (12)
N30.0424 (18)0.0392 (16)0.0305 (14)0.0038 (13)0.0020 (13)0.0046 (13)
C10.057 (3)0.046 (2)0.040 (2)0.0032 (19)0.0030 (18)0.0036 (17)
C20.055 (3)0.059 (3)0.052 (2)0.013 (2)0.002 (2)0.002 (2)
C30.079 (3)0.050 (3)0.063 (3)0.024 (2)0.005 (3)0.004 (2)
C40.081 (4)0.040 (2)0.061 (3)0.012 (2)0.003 (2)0.008 (2)
C50.065 (3)0.038 (2)0.0321 (19)0.0008 (18)0.0058 (17)0.0008 (16)
C60.075 (3)0.038 (2)0.0339 (18)0.0050 (19)0.0011 (18)0.0018 (16)
C70.063 (3)0.051 (2)0.0337 (19)0.016 (2)0.0054 (18)0.0006 (17)
C80.046 (2)0.049 (2)0.0350 (18)0.0136 (17)0.0050 (16)0.0101 (17)
C90.054 (3)0.071 (3)0.049 (2)0.012 (2)0.018 (2)0.007 (2)
C100.039 (2)0.076 (3)0.067 (3)0.004 (2)0.009 (2)0.021 (2)
C110.042 (2)0.061 (3)0.064 (3)0.003 (2)0.001 (2)0.007 (2)
C120.045 (2)0.049 (2)0.040 (2)0.0027 (18)0.0032 (17)0.0058 (18)
C130.0323 (18)0.041 (2)0.0286 (16)0.0036 (15)0.0022 (14)0.0032 (15)
C140.043 (2)0.0371 (19)0.0302 (17)0.0023 (16)0.0026 (15)0.0044 (14)
C150.053 (2)0.0364 (19)0.0293 (17)0.0008 (17)0.0013 (16)0.0033 (14)
C160.047 (2)0.0382 (19)0.0306 (17)0.0021 (16)0.0017 (16)0.0015 (15)
C170.056 (2)0.0366 (19)0.0268 (16)0.0021 (16)0.0010 (16)0.0009 (14)
C180.062 (3)0.0361 (18)0.0264 (16)0.0039 (18)0.0039 (17)0.0013 (14)
Geometric parameters (Å, º) top
Zn—N32.082 (3)C5—C61.512 (6)
Zn—N12.094 (3)C6—H6A0.9700
Zn—O12.098 (2)C6—H6B0.9700
Zn—OW12.110 (3)C7—C81.511 (6)
Zn—N22.187 (3)C7—H7A0.9700
Zn—O22.285 (3)C7—H7B0.9700
Zn—C132.533 (3)C8—C91.391 (6)
Cl1—O41.397 (4)C9—C101.360 (6)
Cl1—O61.409 (3)C9—H90.9300
Cl1—O31.414 (4)C10—C111.393 (6)
Cl1—O51.425 (4)C10—H100.9300
O1—C131.274 (4)C11—C121.372 (6)
O2—C131.242 (4)C11—H110.9300
OW1—H19A0.74 (4)C12—H120.9300
OW1—H19B0.80 (5)C13—C141.507 (5)
N1—C11.329 (5)C14—C151.519 (5)
N1—C51.352 (5)C14—H14A0.9700
N2—C181.481 (4)C14—H14B0.9700
N2—C71.481 (5)C15—C161.518 (5)
N2—C61.506 (5)C15—H15A0.9700
N3—C121.326 (5)C15—H15B0.9700
N3—C81.334 (4)C16—C171.530 (5)
C1—C21.377 (6)C16—H16A0.9700
C1—H10.9300C16—H16B0.9700
C2—C31.374 (6)C17—C18i1.515 (5)
C2—H20.9300C17—H17A0.9700
C3—C41.362 (6)C17—H17B0.9700
C3—H30.9300C18—C17ii1.515 (5)
C4—C51.378 (6)C18—H18A0.9700
C4—H40.9300C18—H18B0.9700
N3—Zn—N1159.26 (12)C5—C6—H6A109.2
N3—Zn—O1101.18 (11)N2—C6—H6B109.2
N1—Zn—O199.10 (11)C5—C6—H6B109.2
N3—Zn—OW187.66 (12)H6A—C6—H6B107.9
N1—Zn—OW185.17 (12)N2—C7—C8113.2 (3)
O1—Zn—OW198.44 (10)N2—C7—H7A108.9
N3—Zn—N280.98 (12)C8—C7—H7A108.9
N1—Zn—N279.74 (11)N2—C7—H7B108.9
O1—Zn—N2170.28 (10)C8—C7—H7B108.9
OW1—Zn—N291.09 (11)H7A—C7—H7B107.7
N3—Zn—O290.97 (11)N3—C8—C9120.6 (4)
N1—Zn—O2103.08 (11)N3—C8—C7117.4 (3)
O1—Zn—O259.39 (8)C9—C8—C7121.9 (4)
OW1—Zn—O2157.07 (10)C10—C9—C8119.4 (4)
N2—Zn—O2111.30 (9)C10—C9—H9120.3
N3—Zn—C1395.90 (11)C8—C9—H9120.3
N1—Zn—C13103.83 (11)C9—C10—C11119.9 (4)
O1—Zn—C1330.11 (10)C9—C10—H10120.1
OW1—Zn—C13128.17 (11)C11—C10—H10120.1
N2—Zn—C13140.61 (11)C12—C11—C10117.1 (4)
O2—Zn—C1329.31 (9)C12—C11—H11121.5
O4—Cl1—O6109.0 (3)C10—C11—H11121.5
O4—Cl1—O3109.8 (3)N3—C12—C11123.4 (4)
O6—Cl1—O3108.1 (3)N3—C12—H12118.3
O4—Cl1—O5112.0 (3)C11—C12—H12118.3
O6—Cl1—O5109.4 (3)O2—C13—O1119.8 (3)
O3—Cl1—O5108.5 (3)O2—C13—C14120.7 (3)
C13—O1—Zn94.21 (19)O1—C13—C14119.5 (3)
C13—O2—Zn86.5 (2)O2—C13—Zn64.20 (19)
Zn—OW1—H19A116 (4)O1—C13—Zn55.67 (16)
Zn—OW1—H19B122 (3)C14—C13—Zn173.6 (2)
H19A—OW1—H19B111 (5)C13—C14—C15115.6 (3)
C1—N1—C5117.8 (3)C13—C14—H14A108.4
C1—N1—Zn127.5 (3)C15—C14—H14A108.4
C5—N1—Zn113.6 (3)C13—C14—H14B108.4
C18—N2—C7111.7 (3)C15—C14—H14B108.4
C18—N2—C6107.4 (3)H14A—C14—H14B107.4
C7—N2—C6112.0 (3)C16—C15—C14111.6 (3)
C18—N2—Zn117.1 (2)C16—C15—H15A109.3
C7—N2—Zn105.4 (2)C14—C15—H15A109.3
C6—N2—Zn103.0 (2)C16—C15—H15B109.3
C12—N3—C8119.5 (3)C14—C15—H15B109.3
C12—N3—Zn125.9 (2)H15A—C15—H15B108.0
C8—N3—Zn114.6 (3)C15—C16—C17113.7 (3)
N1—C1—C2123.5 (4)C15—C16—H16A108.8
N1—C1—H1118.3C17—C16—H16A108.8
C2—C1—H1118.3C15—C16—H16B108.8
C3—C2—C1118.1 (4)C17—C16—H16B108.8
C3—C2—H2121.0H16A—C16—H16B107.7
C1—C2—H2121.0C18i—C17—C16109.4 (3)
C4—C3—C2119.5 (4)C18i—C17—H17A109.8
C4—C3—H3120.2C16—C17—H17A109.8
C2—C3—H3120.2C18i—C17—H17B109.8
C3—C4—C5119.6 (4)C16—C17—H17B109.8
C3—C4—H4120.2H17A—C17—H17B108.2
C5—C4—H4120.2N2—C18—C17ii116.1 (3)
N1—C5—C4121.5 (4)N2—C18—H18A108.3
N1—C5—C6116.4 (3)C17ii—C18—H18A108.3
C4—C5—C6121.9 (4)N2—C18—H18B108.3
N2—C6—C5112.0 (3)C17ii—C18—H18B108.3
N2—C6—H6A109.2H18A—C18—H18B107.4
N3—Zn—O1—C1382.4 (2)C1—C2—C3—C40.2 (7)
N1—Zn—O1—C13101.9 (2)C2—C3—C4—C50.7 (7)
OW1—Zn—O1—C13171.7 (2)C1—N1—C5—C41.6 (6)
O2—Zn—O1—C132.02 (19)Zn—N1—C5—C4170.3 (3)
N3—Zn—O2—C13100.4 (2)C1—N1—C5—C6173.5 (3)
N1—Zn—O2—C1395.0 (2)Zn—N1—C5—C64.8 (4)
O1—Zn—O2—C132.1 (2)C3—C4—C5—N11.6 (7)
OW1—Zn—O2—C1314.1 (4)C3—C4—C5—C6173.2 (4)
N2—Zn—O2—C13178.9 (2)C18—N2—C6—C584.5 (4)
N3—Zn—N1—C1167.5 (3)C7—N2—C6—C5152.4 (3)
O1—Zn—N1—C10.5 (3)Zn—N2—C6—C539.6 (3)
OW1—Zn—N1—C197.3 (3)N1—C5—C6—N225.6 (5)
N2—Zn—N1—C1170.7 (3)C4—C5—C6—N2159.3 (4)
O2—Zn—N1—C161.0 (3)C18—N2—C7—C897.2 (4)
C13—Zn—N1—C130.9 (3)C6—N2—C7—C8142.3 (3)
N3—Zn—N1—C50.1 (5)Zn—N2—C7—C831.0 (3)
O1—Zn—N1—C5167.8 (2)C12—N3—C8—C92.8 (5)
OW1—Zn—N1—C570.0 (2)Zn—N3—C8—C9178.3 (3)
N2—Zn—N1—C521.9 (2)C12—N3—C8—C7173.9 (3)
O2—Zn—N1—C5131.6 (2)Zn—N3—C8—C75.0 (4)
C13—Zn—N1—C5161.8 (2)N2—C7—C8—N326.0 (5)
N3—Zn—N2—C18102.7 (3)N2—C7—C8—C9157.4 (3)
N1—Zn—N2—C1885.0 (3)N3—C8—C9—C103.6 (6)
OW1—Zn—N2—C18169.8 (3)C7—C8—C9—C10173.0 (4)
O2—Zn—N2—C1815.2 (3)C8—C9—C10—C112.2 (7)
C13—Zn—N2—C1814.4 (4)C9—C10—C11—C120.2 (6)
N3—Zn—N2—C722.2 (2)C8—N3—C12—C110.8 (6)
N1—Zn—N2—C7150.1 (2)Zn—N3—C12—C11179.5 (3)
OW1—Zn—N2—C765.2 (2)C10—C11—C12—N30.5 (6)
O2—Zn—N2—C7109.7 (2)Zn—O2—C13—O13.4 (3)
C13—Zn—N2—C7110.6 (2)Zn—O2—C13—C14175.4 (3)
N3—Zn—N2—C6139.8 (2)Zn—O1—C13—O23.7 (4)
N1—Zn—N2—C632.6 (2)Zn—O1—C13—C14175.1 (3)
OW1—Zn—N2—C652.3 (2)N3—Zn—C13—O281.4 (2)
O2—Zn—N2—C6132.7 (2)N1—Zn—C13—O292.2 (2)
C13—Zn—N2—C6131.9 (2)O1—Zn—C13—O2176.5 (3)
N1—Zn—N3—C12167.3 (3)OW1—Zn—C13—O2173.1 (2)
O1—Zn—N3—C120.6 (3)N2—Zn—C13—O21.6 (3)
OW1—Zn—N3—C1297.5 (3)N3—Zn—C13—O1102.1 (2)
N2—Zn—N3—C12171.0 (3)N1—Zn—C13—O184.3 (2)
O2—Zn—N3—C1259.6 (3)OW1—Zn—C13—O110.5 (3)
C13—Zn—N3—C1230.6 (3)N2—Zn—C13—O1174.9 (2)
N1—Zn—N3—C811.5 (5)O2—Zn—C13—O1176.5 (3)
O1—Zn—N3—C8179.4 (2)O2—C13—C14—C15154.2 (3)
OW1—Zn—N3—C881.3 (3)O1—C13—C14—C1524.6 (5)
N2—Zn—N3—C810.2 (2)C13—C14—C15—C16169.0 (3)
O2—Zn—N3—C8121.6 (2)C14—C15—C16—C17175.6 (3)
C13—Zn—N3—C8150.6 (2)C15—C16—C17—C18i177.0 (3)
C5—N1—C1—C20.6 (6)C7—N2—C18—C17ii59.2 (4)
Zn—N1—C1—C2167.5 (3)C6—N2—C18—C17ii177.6 (3)
N1—C1—C2—C30.2 (7)Zn—N2—C18—C17ii62.5 (4)
Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x, y+1/2, z1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
OW1—H19A···O1iii0.74 (4)1.95 (5)2.683 (4)175 (5)
OW1—H19B···O6iii0.80 (5)2.02 (5)2.817 (5)171 (4)
Symmetry code: (iii) x, y+1, z+1.
 

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