Download citation
Download citation
link to html
A peptide biphenyl hybrid compound {systematic name: dimethyl 2,2′-[((2S,2′S)-2,2′-{[(2S,2′S)-1,1′-([1,1′-biphen­yl]-2,2′-dicarbon­yl)bis­(pyrrolidine-1,2-diyl-2-carbon­yl)]bis­(aza­nedi­yl)}bis­(3-phenyl­propano­yl))bis­(aza­nedi­yl)](2S,2′S)-dipropionate hemihydrate}, C50H56N6O10·0.5H2O, was prepared by coupling of [1,1′-biphen­yl]-2,2′-dicarbonyl dichloride, tri­ethyl­amine and the tripeptide Pro–Phe–Ala in CH2Cl2 at 273 K under an N2 atmosphere. In the crystal, the asymmetric unit contains the peptide biphenyl hybrid accompanied by one-half of a water mol­ecule. A C atom of one of the proline rings is disordered between two positions in a 0.746 (11):0.254 (11) ratio. An important structural aspect of peptide compounds is their capacity to self-associate mediated by inter­molecular and intra­molecular hydrogen bonding. This characteristic can be useful in understanding the inter­actions between peptides and biomacromolecular targets, as well as to explain peptide properties.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2056989020000584/vm2226sup1.cif
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989020000584/vm2226Isup2.hkl
Contains datablock I

cdx

Chemdraw file https://doi.org/10.1107/S2056989020000584/vm2226Isup3.cdx
Supplementary material

cdx

Chemdraw file https://doi.org/10.1107/S2056989020000584/vm2226Isup7.cdx
Supplementary material

CCDC reference: 1978230

Key indicators

  • Single-crystal X-ray study
  • T = 100 K
  • Mean [sigma](C-C) = 0.005 Å
  • Disorder in main residue
  • R factor = 0.048
  • wR factor = 0.130
  • Data-to-parameter ratio = 16.8

checkCIF/PLATON results

No syntax errors found



Alert level B PLAT035_ALERT_1_B _chemical_absolute_configuration Info Not Given Please Do ! PLAT094_ALERT_2_B Ratio of Maximum / Minimum Residual Density .... 6.27 Report PLAT097_ALERT_2_B Large Reported Max. (Positive) Residual Density 1.05 eA-3 PLAT910_ALERT_3_B Missing # of FCF Reflection(s) Below Theta(Min). 13 Note PLAT919_ALERT_3_B Reflection # Likely Affected by the Beamstop ... 1 Check PLAT934_ALERT_3_B Number of (Iobs-Icalc)/Sigma(W) > 10 Outliers .. 4 Check
Alert level C DIFMX02_ALERT_1_C The maximum difference density is > 0.1*ZMAX*0.75 The relevant atom site should be identified. PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00463 Ang. PLAT480_ALERT_4_C Long H...A H-Bond Reported H6A ..O2 . 2.67 Ang. PLAT480_ALERT_4_C Long H...A H-Bond Reported H1C ..O7 . 2.63 Ang.
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 7 Note PLAT003_ALERT_2_G Number of Uiso or Uij Restrained non-H Atoms ... 5 Report PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 6 Report PLAT032_ALERT_4_G Std. Uncertainty on Flack Parameter Value High . 0.300 Report PLAT042_ALERT_1_G Calc. and Reported MoietyFormula Strings Differ Please Check PLAT045_ALERT_1_G Calculated and Reported Z Differ by a Factor ... 0.50 Check PLAT172_ALERT_4_G The CIF-Embedded .res File Contains DFIX Records 2 Report PLAT176_ALERT_4_G The CIF-Embedded .res File Contains SADI Records 1 Report PLAT178_ALERT_4_G The CIF-Embedded .res File Contains SIMU Records 1 Report PLAT300_ALERT_4_G Atom Site Occupancy of O11 Constrained at 0.5 Check PLAT300_ALERT_4_G Atom Site Occupancy of H11A Constrained at 0.5 Check PLAT300_ALERT_4_G Atom Site Occupancy of H11B Constrained at 0.5 Check PLAT301_ALERT_3_G Main Residue Disorder ..............(Resd 1 ) 2% Note PLAT302_ALERT_4_G Anion/Solvent/Minor-Residue Disorder (Resd 2 ) 100% Note PLAT304_ALERT_4_G Non-Integer Number of Atoms in ..... (Resd 2 ) 1.50 Check PLAT791_ALERT_4_G Model has Chirality at C3 (Chiral SPGR) S Verify PLAT791_ALERT_4_G Model has Chirality at C6 (Chiral SPGR) S Verify PLAT791_ALERT_4_G Model has Chirality at C36 (Chiral SPGR) S Verify PLAT791_ALERT_4_G Model has Chirality at C38 (Chiral SPGR) S Verify PLAT791_ALERT_4_G Model has Chirality at C47 (Chiral SPGR) S Verify PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 39 Note PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 17 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 8 Info
0 ALERT level A = Most likely a serious problem - resolve or explain 6 ALERT level B = A potentially serious problem, consider carefully 4 ALERT level C = Check. Ensure it is not caused by an omission or oversight 23 ALERT level G = General information/check it is not something unexpected 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 5 ALERT type 2 Indicator that the structure model may be wrong or deficient 6 ALERT type 3 Indicator that the structure quality may be low 17 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check

Computing details top

Data collection: APEX2 (Bruker, 2013); cell refinement: SAINT (Bruker, 2013); data reduction: SAINT (Bruker, 2013); program(s) used to solve structure: olex2.solve (Bourhis et al., 2015); program(s) used to refine structure: SHELXL (Sheldrick, 2015); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).

Dimethyl 2,2'-[((2S,2'S)-2,2'-{[(2S,2'S)-1,1'-([1,1'-biphenyl]-2,2'-dicarbonyl)bis(pyrrolidine-1,2-diyl-2-carbonyl)]bis(azanediyl)}bis(3-phenylpropanoyl))bis(azanediyl)](2S,2'S)-dipropionate hemihydrate top
Crystal data top
C50H56N6O10·0.5H2ODx = 1.226 Mg m3
Mr = 910.01Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 9965 reflections
a = 9.9955 (5) Åθ = 3.1–26.5°
b = 15.8364 (7) ŵ = 0.09 mm1
c = 31.1356 (14) ÅT = 100 K
V = 4928.5 (4) Å3Prism, clear light yellow
Z = 40.28 × 0.2 × 0.15 mm
F(000) = 1932
Data collection top
Bruker D8 Quest CMOS
diffractometer
8909 reflections with I > 2σ(I)
φ and ω scansRint = 0.038
Absorption correction: multi-scan
(SADABS; Bruker, 2013)
θmax = 26.8°, θmin = 2.9°
Tmin = 0.695, Tmax = 0.745h = 1212
43863 measured reflectionsk = 2020
10447 independent reflectionsl = 3932
Refinement top
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.048 w = 1/[σ2(Fo2) + (0.0688P)2 + 1.586P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.130(Δ/σ)max < 0.001
S = 1.06Δρmax = 1.05 e Å3
10447 reflectionsΔρmin = 0.17 e Å3
621 parametersAbsolute structure: Flack x determined using 3422 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
39 restraintsAbsolute structure parameter: 0.1 (3)
Primary atom site location: iterative
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
O80.5783 (2)0.35379 (15)0.61299 (7)0.0290 (5)
O50.1677 (2)0.52485 (14)0.62202 (7)0.0300 (5)
O60.1527 (2)0.33804 (15)0.71036 (7)0.0297 (5)
O70.1823 (2)0.20517 (14)0.61792 (8)0.0328 (5)
O90.7545 (2)0.24915 (17)0.69600 (8)0.0368 (6)
O40.3271 (2)0.67992 (16)0.56633 (8)0.0358 (6)
O100.5908 (3)0.18598 (15)0.65811 (8)0.0376 (6)
O30.3607 (2)0.78162 (16)0.46470 (8)0.0366 (6)
O20.0132 (3)0.94017 (16)0.53066 (9)0.0458 (7)
N50.2180 (2)0.34595 (17)0.61273 (8)0.0211 (5)
H50.18690.39680.61820.025*
O10.1553 (3)1.04279 (16)0.51105 (9)0.0452 (7)
N20.1356 (3)0.66860 (16)0.52816 (8)0.0251 (6)
H20.04900.65870.52920.030*
N60.4311 (3)0.32243 (18)0.66559 (8)0.0259 (6)
H60.34660.31780.67310.031*
N30.1878 (3)0.65960 (17)0.64292 (8)0.0296 (6)
N40.0114 (2)0.37316 (16)0.66369 (8)0.0229 (5)
N10.1567 (3)0.82474 (17)0.48518 (10)0.0336 (7)
H10.07970.80920.49640.040*
C50.2483 (3)0.7659 (2)0.47812 (10)0.0255 (7)
C20.1053 (4)0.9653 (2)0.50913 (12)0.0329 (8)
C490.6401 (3)0.2466 (2)0.68322 (10)0.0273 (7)
C370.1444 (3)0.27814 (19)0.62330 (10)0.0234 (6)
C190.2126 (3)0.5774 (2)0.64748 (10)0.0236 (6)
C460.4634 (3)0.34112 (19)0.62472 (10)0.0226 (6)
C400.2546 (3)0.3822 (2)0.52165 (9)0.0246 (6)
C380.3471 (3)0.3369 (2)0.59253 (9)0.0226 (6)
H380.34910.27880.58000.027*
C320.0613 (3)0.3867 (2)0.69939 (10)0.0247 (7)
C250.2567 (3)0.52550 (19)0.72356 (9)0.0227 (6)
C200.3034 (3)0.55266 (19)0.68390 (9)0.0231 (6)
C330.1105 (3)0.4298 (2)0.64412 (10)0.0272 (7)
H33A0.08320.48960.64680.033*
H33B0.19990.42230.65730.033*
C450.1501 (3)0.4389 (2)0.51655 (10)0.0284 (7)
H450.14900.48960.53280.034*
C220.5320 (3)0.5374 (2)0.70738 (12)0.0320 (7)
H220.62530.54170.70200.038*
C310.0216 (3)0.4610 (2)0.72602 (10)0.0268 (7)
C340.1097 (3)0.4010 (2)0.59730 (10)0.0306 (7)
H34A0.19460.41580.58270.037*
H34B0.03410.42630.58130.037*
C390.3631 (3)0.3978 (2)0.55481 (9)0.0254 (7)
H39A0.35740.45670.56530.031*
H39B0.45210.38970.54150.031*
C410.2561 (3)0.3086 (2)0.49701 (10)0.0292 (7)
H410.32790.26980.50000.035*
C230.4861 (3)0.5099 (2)0.74670 (12)0.0328 (8)
H230.54810.49480.76850.039*
C430.0489 (4)0.3485 (2)0.46349 (11)0.0332 (8)
H430.02130.33720.44370.040*
C80.1648 (4)0.6529 (2)0.40682 (10)0.0312 (7)
C140.2050 (3)0.6776 (2)0.56506 (10)0.0265 (7)
C440.0472 (4)0.4222 (2)0.48784 (11)0.0316 (8)
H440.02450.46120.48480.038*
C260.1115 (3)0.5259 (2)0.73614 (9)0.0255 (7)
C70.1065 (3)0.6452 (2)0.45158 (10)0.0306 (7)
H7A0.08290.58540.45700.037*
H7B0.02320.67880.45310.037*
C470.5353 (3)0.3100 (2)0.69728 (10)0.0269 (7)
H470.58050.36540.70250.032*
C60.2021 (3)0.6751 (2)0.48676 (10)0.0265 (7)
H6A0.28230.63740.48690.032*
C420.1532 (4)0.2917 (2)0.46815 (10)0.0326 (8)
H420.15460.24120.45170.039*
C210.4407 (3)0.5586 (2)0.67586 (11)0.0286 (7)
H210.47140.57730.64860.034*
C300.1064 (4)0.4624 (3)0.74307 (11)0.0395 (9)
H300.16680.41790.73660.047*
C360.0037 (3)0.2945 (2)0.63950 (10)0.0252 (7)
H360.02630.24590.65760.030*
C240.3505 (3)0.5042 (2)0.75457 (10)0.0293 (7)
H240.32070.48520.78190.035*
C90.1242 (4)0.7179 (2)0.37993 (11)0.0383 (8)
H90.05800.75680.38930.046*
C350.0937 (3)0.3060 (2)0.60144 (11)0.0307 (7)
H35A0.05600.28150.57480.037*
H35B0.18080.27870.60750.037*
C40.1237 (4)0.9350 (2)0.43102 (12)0.0353 (8)
H4A0.17710.90560.40920.053*
H4B0.12960.99610.42640.053*
H4C0.03020.91700.42880.053*
C290.1478 (4)0.5278 (3)0.76945 (13)0.0531 (12)
H290.23500.52710.78160.064*
C150.1186 (4)0.6907 (2)0.60477 (10)0.0317 (8)
H150.02940.66290.60140.038*
C270.0672 (3)0.5929 (3)0.76131 (12)0.0390 (9)
H270.12560.63870.76720.047*
C130.2600 (4)0.5956 (2)0.39230 (11)0.0355 (8)
H130.28860.55100.41050.043*
C30.1767 (3)0.9136 (2)0.47531 (12)0.0334 (8)
H30.27450.92660.47640.040*
C120.3135 (4)0.6032 (3)0.35134 (12)0.0440 (9)
H120.37760.56340.34140.053*
C100.1802 (5)0.7262 (3)0.33924 (12)0.0451 (10)
H100.15390.77170.32120.054*
C280.0625 (4)0.5933 (3)0.77791 (14)0.0561 (13)
H280.09170.63930.79510.067*
C110.2732 (4)0.6690 (3)0.32496 (12)0.0465 (10)
H110.31000.67450.29700.056*
C180.2329 (4)0.7290 (2)0.67105 (12)0.0388 (9)
H18C0.32320.74900.66280.047*0.746 (11)
H18D0.23400.71140.70160.047*0.746 (11)
H18A0.32920.72450.67820.047*0.254 (11)
H18B0.17980.73230.69780.047*0.254 (11)
C480.4734 (4)0.2800 (3)0.73931 (11)0.0402 (9)
H48A0.40470.32020.74850.060*
H48B0.54300.27610.76140.060*
H48C0.43260.22430.73510.060*
C500.6830 (5)0.1212 (2)0.64429 (13)0.0473 (10)
H50A0.74170.14380.62190.071*
H50B0.63270.07300.63280.071*
H50C0.73720.10260.66880.071*
C160.1028 (5)0.7859 (3)0.61383 (13)0.0511 (11)
H16C0.01170.80530.60620.061*0.746 (11)
H16D0.16880.81900.59710.061*0.746 (11)
H16A0.10910.81890.58690.061*0.254 (11)
H16B0.01560.79780.62760.061*0.254 (11)
C10.0909 (6)1.0984 (3)0.54255 (14)0.0606 (13)
H1A0.00511.10170.53650.091*
H1B0.13031.15490.54070.091*
H1C0.10461.07560.57150.091*
O110.3543 (5)0.0810 (3)0.6507 (2)0.0484 (14)0.5
H11A0.31640.11110.63070.073*0.5
H11B0.40780.11610.66360.073*0.5
C17B0.1282 (8)0.7962 (4)0.6631 (2)0.0526 (18)0.746 (11)
H17A0.16250.85330.67000.063*0.746 (11)
H17B0.04590.78540.67990.063*0.746 (11)
C17A0.204 (2)0.8050 (9)0.6403 (5)0.047 (3)0.254 (11)
H17C0.18010.85550.65740.057*0.254 (11)
H17D0.28470.81820.62330.057*0.254 (11)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O80.0180 (11)0.0412 (13)0.0278 (12)0.0043 (9)0.0010 (9)0.0014 (10)
O50.0355 (13)0.0288 (11)0.0256 (11)0.0027 (10)0.0080 (10)0.0001 (10)
O60.0248 (11)0.0390 (12)0.0254 (11)0.0010 (10)0.0052 (9)0.0020 (10)
O70.0321 (12)0.0245 (12)0.0419 (14)0.0017 (10)0.0016 (11)0.0055 (10)
O90.0242 (12)0.0512 (15)0.0351 (13)0.0127 (11)0.0037 (10)0.0015 (11)
O40.0274 (13)0.0468 (14)0.0333 (12)0.0080 (11)0.0101 (10)0.0035 (11)
O100.0392 (14)0.0353 (13)0.0384 (14)0.0094 (11)0.0051 (11)0.0034 (11)
O30.0253 (12)0.0438 (14)0.0407 (13)0.0030 (11)0.0031 (10)0.0034 (12)
O20.0446 (16)0.0348 (14)0.0578 (17)0.0044 (12)0.0116 (14)0.0067 (13)
N50.0173 (12)0.0239 (13)0.0222 (12)0.0018 (10)0.0022 (10)0.0012 (10)
O10.0634 (18)0.0328 (13)0.0393 (14)0.0167 (13)0.0107 (13)0.0015 (12)
N20.0224 (13)0.0277 (13)0.0252 (13)0.0021 (11)0.0046 (11)0.0002 (11)
N60.0172 (12)0.0391 (15)0.0213 (12)0.0049 (11)0.0014 (10)0.0013 (12)
N30.0371 (15)0.0299 (14)0.0218 (13)0.0084 (12)0.0079 (12)0.0024 (12)
N40.0197 (13)0.0271 (14)0.0220 (12)0.0007 (10)0.0024 (10)0.0025 (11)
N10.0206 (13)0.0251 (14)0.0550 (18)0.0025 (11)0.0028 (13)0.0033 (14)
C50.0217 (15)0.0329 (17)0.0219 (14)0.0012 (13)0.0060 (12)0.0029 (13)
C20.0330 (18)0.0254 (17)0.0403 (19)0.0030 (15)0.0114 (16)0.0037 (15)
C490.0243 (16)0.0335 (17)0.0242 (15)0.0084 (13)0.0011 (13)0.0054 (14)
C370.0239 (15)0.0243 (16)0.0219 (14)0.0009 (12)0.0043 (12)0.0028 (13)
C190.0226 (15)0.0288 (16)0.0194 (14)0.0006 (12)0.0019 (12)0.0003 (13)
C460.0190 (15)0.0261 (16)0.0228 (15)0.0057 (12)0.0002 (12)0.0012 (13)
C400.0254 (15)0.0301 (16)0.0182 (14)0.0049 (13)0.0025 (12)0.0018 (13)
C380.0183 (14)0.0271 (16)0.0224 (14)0.0047 (12)0.0007 (12)0.0025 (13)
C320.0182 (14)0.0348 (17)0.0211 (15)0.0048 (13)0.0005 (12)0.0031 (14)
C250.0175 (14)0.0295 (16)0.0211 (14)0.0007 (12)0.0011 (12)0.0041 (13)
C200.0238 (15)0.0234 (15)0.0220 (15)0.0045 (12)0.0012 (12)0.0034 (13)
C330.0184 (14)0.0346 (17)0.0284 (16)0.0043 (13)0.0021 (13)0.0027 (14)
C450.0318 (17)0.0260 (16)0.0273 (16)0.0054 (13)0.0040 (14)0.0028 (14)
C220.0175 (15)0.0378 (19)0.0405 (19)0.0006 (14)0.0039 (14)0.0035 (16)
C310.0184 (15)0.0426 (19)0.0193 (14)0.0038 (14)0.0020 (12)0.0056 (14)
C340.0210 (15)0.046 (2)0.0248 (16)0.0036 (15)0.0076 (13)0.0003 (15)
C390.0227 (15)0.0329 (17)0.0207 (14)0.0008 (13)0.0006 (12)0.0007 (13)
C410.0299 (17)0.0336 (18)0.0240 (15)0.0007 (14)0.0034 (14)0.0016 (14)
C230.0194 (16)0.045 (2)0.0335 (18)0.0016 (14)0.0076 (14)0.0080 (16)
C430.0337 (18)0.043 (2)0.0233 (16)0.0124 (16)0.0046 (14)0.0028 (15)
C80.0371 (19)0.0316 (17)0.0249 (15)0.0057 (15)0.0093 (14)0.0030 (14)
C140.0281 (16)0.0242 (16)0.0271 (16)0.0065 (13)0.0074 (13)0.0013 (13)
C440.0310 (17)0.0341 (18)0.0298 (17)0.0034 (14)0.0072 (14)0.0076 (15)
C260.0168 (14)0.0420 (18)0.0176 (14)0.0009 (13)0.0022 (12)0.0043 (14)
C70.0336 (18)0.0280 (16)0.0302 (17)0.0032 (14)0.0070 (14)0.0014 (14)
C470.0197 (15)0.0386 (19)0.0225 (15)0.0069 (13)0.0028 (12)0.0011 (14)
C60.0278 (16)0.0278 (16)0.0240 (15)0.0054 (13)0.0035 (13)0.0026 (13)
C420.0368 (18)0.0384 (18)0.0227 (15)0.0092 (15)0.0032 (14)0.0059 (14)
C210.0258 (16)0.0329 (17)0.0271 (16)0.0027 (13)0.0069 (13)0.0037 (14)
C300.0230 (17)0.065 (2)0.0305 (17)0.0115 (17)0.0001 (14)0.0164 (18)
C360.0216 (15)0.0269 (16)0.0270 (16)0.0033 (12)0.0037 (13)0.0027 (13)
C240.0242 (16)0.0427 (19)0.0210 (15)0.0012 (14)0.0001 (13)0.0050 (14)
C90.053 (2)0.0340 (18)0.0280 (17)0.0026 (17)0.0114 (16)0.0049 (16)
C350.0195 (15)0.043 (2)0.0298 (17)0.0022 (14)0.0056 (13)0.0112 (15)
C40.0323 (18)0.0298 (17)0.044 (2)0.0040 (14)0.0060 (16)0.0004 (16)
C290.0184 (17)0.096 (3)0.045 (2)0.004 (2)0.0057 (16)0.036 (2)
C150.0359 (19)0.0358 (18)0.0234 (15)0.0135 (15)0.0040 (14)0.0006 (14)
C270.0215 (16)0.059 (2)0.0369 (19)0.0037 (16)0.0039 (14)0.0240 (19)
C130.042 (2)0.0325 (18)0.0319 (17)0.0042 (16)0.0101 (16)0.0050 (15)
C30.0238 (16)0.0261 (16)0.050 (2)0.0059 (13)0.0012 (15)0.0029 (16)
C120.039 (2)0.056 (2)0.037 (2)0.0027 (18)0.0057 (16)0.0170 (19)
C100.064 (3)0.044 (2)0.0269 (17)0.008 (2)0.0122 (18)0.0006 (17)
C280.0237 (18)0.091 (3)0.054 (2)0.000 (2)0.0028 (17)0.046 (3)
C110.053 (2)0.063 (3)0.0238 (17)0.017 (2)0.0078 (17)0.0028 (18)
C180.050 (2)0.0321 (18)0.0340 (18)0.0109 (16)0.0127 (17)0.0093 (15)
C480.0300 (18)0.066 (3)0.0249 (17)0.0155 (18)0.0011 (14)0.0071 (18)
C500.068 (3)0.0342 (19)0.039 (2)0.0199 (19)0.003 (2)0.0003 (17)
C160.074 (3)0.043 (2)0.036 (2)0.033 (2)0.003 (2)0.0010 (18)
C10.113 (4)0.032 (2)0.037 (2)0.014 (2)0.006 (2)0.0101 (18)
O110.023 (2)0.048 (3)0.074 (4)0.004 (2)0.008 (3)0.001 (3)
C17B0.077 (4)0.044 (3)0.037 (3)0.028 (3)0.012 (3)0.015 (2)
C17A0.074 (7)0.029 (6)0.040 (6)0.015 (6)0.010 (6)0.019 (5)
Geometric parameters (Å, º) top
O8—C461.221 (4)C8—C91.388 (5)
O5—C191.234 (4)C8—C131.390 (5)
O6—C321.243 (4)C14—C151.523 (5)
O7—C371.227 (4)C44—H440.9500
O9—C491.211 (4)C26—C271.391 (5)
O4—C141.221 (4)C7—H7A0.9900
O10—C491.333 (4)C7—H7B0.9900
O10—C501.445 (4)C7—C61.529 (4)
O3—C51.224 (4)C47—H471.0000
O2—C21.207 (4)C47—C481.523 (5)
N5—H50.8800C6—H6A1.0000
N5—C371.343 (4)C42—H420.9500
N5—C381.443 (4)C21—H210.9500
O1—C21.326 (4)C30—H300.9500
O1—C11.466 (5)C30—C291.384 (6)
N2—H20.8800C36—H361.0000
N2—C141.350 (4)C36—C351.544 (4)
N2—C61.454 (4)C24—H240.9500
N6—H60.8800C9—H90.9500
N6—C461.346 (4)C9—C101.391 (5)
N6—C471.448 (4)C35—H35A0.9900
N3—C191.332 (4)C35—H35B0.9900
N3—C151.460 (4)C4—H4A0.9800
N3—C181.476 (4)C4—H4B0.9800
N4—C321.345 (4)C4—H4C0.9800
N4—C331.469 (4)C4—C31.515 (5)
N4—C361.463 (4)C29—H290.9500
N1—H10.8800C29—C281.369 (6)
N1—C51.325 (4)C15—H151.0000
N1—C31.454 (4)C15—C161.542 (5)
C5—C61.534 (5)C27—H270.9500
C2—C31.513 (5)C27—C281.395 (5)
C49—C471.515 (4)C13—H130.9500
C37—C361.516 (4)C13—C121.388 (5)
C19—C201.505 (4)C3—H31.0000
C46—C381.536 (4)C12—H120.9500
C40—C451.386 (5)C12—C111.387 (6)
C40—C391.518 (4)C10—H100.9500
C40—C411.396 (5)C10—C111.372 (6)
C38—H381.0000C28—H280.9500
C38—C391.528 (4)C11—H110.9500
C32—C311.492 (5)C18—H18C0.9900
C25—C201.388 (4)C18—H18D0.9900
C25—C261.503 (4)C18—H18A0.9900
C25—C241.387 (4)C18—H18B0.9900
C20—C211.398 (5)C18—C17B1.513 (6)
C33—H33A0.9900C18—C17A1.566 (15)
C33—H33B0.9900C48—H48A0.9800
C33—C341.527 (4)C48—H48B0.9800
C45—H450.9500C48—H48C0.9800
C45—C441.388 (5)C50—H50A0.9800
C22—H220.9500C50—H50B0.9800
C22—C231.378 (5)C50—H50C0.9800
C22—C211.382 (5)C16—H16C0.9900
C31—C261.402 (5)C16—H16D0.9900
C31—C301.385 (5)C16—H16A0.9900
C34—H34A0.9900C16—H16B0.9900
C34—H34B0.9900C16—C17B1.563 (7)
C34—C351.519 (5)C16—C17A1.335 (17)
C39—H39A0.9900C1—H1A0.9800
C39—H39B0.9900C1—H1B0.9800
C41—H410.9500C1—H1C0.9800
C41—C421.391 (5)O11—H11A0.8701
C23—H230.9500O11—H11B0.8694
C23—C241.380 (5)C17B—H17A0.9900
C43—H430.9500C17B—H17B0.9900
C43—C441.392 (5)C17A—H17C0.9900
C43—C421.386 (5)C17A—H17D0.9900
C8—C71.515 (5)
C49—O10—C50116.8 (3)C41—C42—H42120.0
C37—N5—H5119.4C43—C42—C41119.9 (3)
C37—N5—C38121.2 (3)C43—C42—H42120.0
C38—N5—H5119.4C20—C21—H21119.8
C2—O1—C1114.9 (3)C22—C21—C20120.3 (3)
C14—N2—H2119.6C22—C21—H21119.8
C14—N2—C6120.8 (3)C31—C30—H30119.5
C6—N2—H2119.6C29—C30—C31121.1 (4)
C46—N6—H6119.9C29—C30—H30119.5
C46—N6—C47120.1 (3)N4—C36—C37114.4 (2)
C47—N6—H6119.9N4—C36—H36109.5
C19—N3—C15120.3 (3)N4—C36—C35103.3 (2)
C19—N3—C18127.4 (3)C37—C36—H36109.5
C15—N3—C18112.1 (3)C37—C36—C35110.5 (3)
C32—N4—C33127.6 (3)C35—C36—H36109.5
C32—N4—C36120.4 (3)C25—C24—H24119.2
C36—N4—C33112.1 (2)C23—C24—C25121.6 (3)
C5—N1—H1118.3C23—C24—H24119.2
C5—N1—C3123.4 (3)C8—C9—H9120.0
C3—N1—H1118.3C8—C9—C10120.1 (4)
O3—C5—N1123.2 (3)C10—C9—H9120.0
O3—C5—C6121.8 (3)C34—C35—C36104.4 (3)
N1—C5—C6115.0 (3)C34—C35—H35A110.9
O2—C2—O1124.6 (4)C34—C35—H35B110.9
O2—C2—C3124.6 (3)C36—C35—H35A110.9
O1—C2—C3110.8 (3)C36—C35—H35B110.9
O9—C49—O10124.4 (3)H35A—C35—H35B108.9
O9—C49—C47122.4 (3)H4A—C4—H4B109.5
O10—C49—C47113.0 (3)H4A—C4—H4C109.5
O7—C37—N5123.4 (3)H4B—C4—H4C109.5
O7—C37—C36119.5 (3)C3—C4—H4A109.5
N5—C37—C36116.9 (3)C3—C4—H4B109.5
O5—C19—N3121.5 (3)C3—C4—H4C109.5
O5—C19—C20121.9 (3)C30—C29—H29120.2
N3—C19—C20116.6 (3)C28—C29—C30119.6 (4)
O8—C46—N6123.0 (3)C28—C29—H29120.2
O8—C46—C38121.6 (3)N3—C15—C14110.2 (3)
N6—C46—C38115.2 (3)N3—C15—H15111.1
C45—C40—C39120.8 (3)N3—C15—C16103.3 (3)
C45—C40—C41119.1 (3)C14—C15—H15111.1
C41—C40—C39120.1 (3)C14—C15—C16109.9 (3)
N5—C38—C46112.8 (2)C16—C15—H15111.1
N5—C38—H38106.2C26—C27—H27119.7
N5—C38—C39111.5 (2)C26—C27—C28120.6 (4)
C46—C38—H38106.2C28—C27—H27119.7
C39—C38—C46113.3 (3)C8—C13—H13119.8
C39—C38—H38106.2C12—C13—C8120.4 (4)
O6—C32—N4121.7 (3)C12—C13—H13119.8
O6—C32—C31122.1 (3)N1—C3—C2108.2 (3)
N4—C32—C31116.2 (3)N1—C3—C4111.1 (3)
C20—C25—C26123.7 (3)N1—C3—H3109.0
C24—C25—C20117.9 (3)C2—C3—C4110.4 (3)
C24—C25—C26118.2 (3)C2—C3—H3109.0
C25—C20—C19123.3 (3)C4—C3—H3109.0
C25—C20—C21120.7 (3)C13—C12—H12120.1
C21—C20—C19116.1 (3)C11—C12—C13119.8 (4)
N4—C33—H33A111.3C11—C12—H12120.1
N4—C33—H33B111.3C9—C10—H10119.8
N4—C33—C34102.2 (2)C11—C10—C9120.4 (4)
H33A—C33—H33B109.2C11—C10—H10119.8
C34—C33—H33A111.3C29—C28—C27120.2 (4)
C34—C33—H33B111.3C29—C28—H28119.9
C40—C45—H45119.7C27—C28—H28119.9
C40—C45—C44120.6 (3)C12—C11—H11120.0
C44—C45—H45119.7C10—C11—C12120.1 (4)
C23—C22—H22120.4C10—C11—H11120.0
C23—C22—C21119.2 (3)N3—C18—H18C111.3
C21—C22—H22120.4N3—C18—H18D111.3
C26—C31—C32122.2 (3)N3—C18—H18A112.0
C30—C31—C32118.1 (3)N3—C18—H18B112.0
C30—C31—C26119.6 (3)N3—C18—C17B102.4 (3)
C33—C34—H34A111.3N3—C18—C17A98.7 (6)
C33—C34—H34B111.3H18C—C18—H18D109.2
H34A—C34—H34B109.2H18A—C18—H18B109.7
C35—C34—C33102.4 (3)C17B—C18—H18C111.3
C35—C34—H34A111.3C17B—C18—H18D111.3
C35—C34—H34B111.3C17A—C18—H18A112.0
C40—C39—C38110.2 (3)C17A—C18—H18B112.0
C40—C39—H39A109.6C47—C48—H48A109.5
C40—C39—H39B109.6C47—C48—H48B109.5
C38—C39—H39A109.6C47—C48—H48C109.5
C38—C39—H39B109.6H48A—C48—H48B109.5
H39A—C39—H39B108.1H48A—C48—H48C109.5
C40—C41—H41119.7H48B—C48—H48C109.5
C42—C41—C40120.5 (3)O10—C50—H50A109.5
C42—C41—H41119.7O10—C50—H50B109.5
C22—C23—H23119.8O10—C50—H50C109.5
C22—C23—C24120.4 (3)H50A—C50—H50B109.5
C24—C23—H23119.8H50A—C50—H50C109.5
C44—C43—H43120.1H50B—C50—H50C109.5
C42—C43—H43120.1C15—C16—H16C110.7
C42—C43—C44119.8 (3)C15—C16—H16D110.7
C9—C8—C7120.1 (3)C15—C16—H16A110.8
C9—C8—C13119.2 (3)C15—C16—H16B110.8
C13—C8—C7120.6 (3)C15—C16—C17B105.4 (3)
O4—C14—N2123.0 (3)H16C—C16—H16D108.8
O4—C14—C15122.5 (3)H16A—C16—H16B108.8
N2—C14—C15114.4 (3)C17B—C16—H16C110.7
C45—C44—C43120.1 (3)C17B—C16—H16D110.7
C45—C44—H44120.0C17A—C16—C15104.9 (6)
C43—C44—H44120.0C17A—C16—H16A110.8
C31—C26—C25123.9 (3)C17A—C16—H16B110.8
C27—C26—C25117.3 (3)O1—C1—H1A109.5
C27—C26—C31118.8 (3)O1—C1—H1B109.5
C8—C7—H7A108.9O1—C1—H1C109.5
C8—C7—H7B108.9H1A—C1—H1B109.5
C8—C7—C6113.2 (3)H1A—C1—H1C109.5
H7A—C7—H7B107.8H1B—C1—H1C109.5
C6—C7—H7A108.9H11A—O11—H11B104.4
C6—C7—H7B108.9C18—C17B—C16101.5 (4)
N6—C47—C49113.0 (3)C18—C17B—H17A111.5
N6—C47—H47108.4C18—C17B—H17B111.5
N6—C47—C48109.6 (3)C16—C17B—H17A111.5
C49—C47—H47108.4C16—C17B—H17B111.5
C49—C47—C48108.9 (3)H17A—C17B—H17B109.3
C48—C47—H47108.4C18—C17A—H17C109.6
N2—C6—C5111.1 (3)C18—C17A—H17D109.6
N2—C6—C7109.1 (3)C16—C17A—C18110.2 (11)
N2—C6—H6A108.6C16—C17A—H17C109.6
C5—C6—H6A108.6C16—C17A—H17D109.6
C7—C6—C5110.7 (3)H17C—C17A—H17D108.1
C7—C6—H6A108.6
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O11—H11B···O100.872.152.899 (6)145
O11—H11A···O70.872.032.804 (6)145
C29—H29···O11i0.952.573.339 (7)138
N5—H5···O50.882.042.892 (3)163
N2—H2···O3ii0.882.112.867 (4)143
C6—H6A···O2iii1.002.673.647 (4)165
C4—H4C···O4ii0.982.553.480 (4)159
C27—H27···O9iv0.952.413.327 (5)162
C1—H1B···O7v0.982.593.033 (5)108
C1—H1C···O7v0.982.633.033 (5)105
Symmetry codes: (i) x, y+1/2, z+3/2; (ii) x1/2, y+3/2, z+1; (iii) x+1/2, y+1/2, z+1; (iv) x+1, y+1/2, z+3/2; (v) x, y+1, z.
Backbone torsion angles ω, Φ, Ψ (°) for the two tripeptide fragments top
Pro1ω1C20—C19—N3—C15170.3 (3)
Φ1C19—N3—C15—C14-66.2 (4)
Ψ1N3—C15—C14—N2152.4 (3)
Phe2ω2C15—C14—N2—C6165.7 (3)
Φ2C14—N2—C6—C5-68.9 (4)
Ψ2N2—C6—C5—N1-48.1 (4)
Ala3ω3C6—C5—N1—C3-174.4 (3)
Φ3C5—N1—C3—C2-145.1 (3)
Ψ3N1—C3—C2—O1158.6 (3)
Pro4ω4C31—C32—N4—C36-169.3 (3)
Φ4C32—N4—C36—C37-58.8 (3)
Ψ4N4—C36—C37—N5-32.5 (4)
Phe5ω5C36—C37—N5—C38-173.0 (3)
Φ5C37—N5—C38—C46-96.4 (3)
Ψ5N5—C38—C46—N622.6 (4)
Ala6ω6C38—C46—N6—C47169.3 (3)
Φ6C46—N6—C47—C49-52.1 (4)
Ψ6N6—C47—C49—O10-31.8 (4)
 

Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds