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A concise and efficient synthesis of 6-benzimidazolyl-5-nitrosopyrimidines has been developed using Schiff base-type inter­mediates derived from N4-(2-amino­phen­yl)-6-meth­oxy-5-nitro­sopyrimidine-2,4-di­amine. 6-Meth­oxy-N4-{2-[(4-methyl­benzyl­idene)amino]­phen­yl}-5-nitro­sopyrimidine-2,4-di­amine, (I), and N4-{2-[(eth­oxy­methyl­idene)amino]­phen­yl}-6-meth­oxy-5-nitro­sopyrimidine-2,4-di­amine, (III), both crystallize from dimethyl sulfoxide solution as the 1:1 solvates C19H18N6O2·C2H6OS, (Ia), and C14H16N6O3·C2H6OS, (IIIa), respectively. The inter­atomic distances in these inter­mediates indicate significant electronic polarization within the substituted pyrimidine system. In each of (Ia) and (IIIa), inter­molecular N—H...O hydrogen bonds generate centrosymmetric four-mol­ecule aggregates. Oxidative ring closure of inter­mediate (I), effected using ammonium hexa­nitratocerate(IV), produced 4-meth­oxy-6-[2-(4-methyl­phenyl-1H-benzimidazol-1-yl]-5-nitrosopyrimidin-2-amine, C19H16N6O2, (II) [Cobo et al. (2018). Private communication (CCDC 1830889). CCDC, Cambridge, England], where the extent of electronic polarization is much less than in (Ia) and (IIIa). A combination of N—H...N and C—H...O hydrogen bonds links the mol­ecules of (II) into complex sheets.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2053229618007015/ky3144sup1.cif
Contains datablocks global, I, III

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229618007015/ky3144Iasup2.hkl
Contains datablock {vcif ERROR: unable to open file /journals/www/c/issues/2018/06/00/ky3144/ky3144Iasup2.hkl - exiting}

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229618007015/ky3144IIIasup3.hkl
Contains datablock {vcif ERROR: unable to open file /journals/www/c/issues/2018/06/00/ky3144/ky3144IIIasup3.hkl - exiting}

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S2053229618007015/ky3144Iasup4.cml
Supplementary material

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S2053229618007015/ky3144IIIasup5.cml
Supplementary material

CCDC references: 1842087; 1842086

Computing details top

For both structures, data collection: APEX3 (Bruker, 2016); cell refinement: SAINT (Bruker, 2016); data reduction: SAINT (Bruker, 2016); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL2014 (Sheldrick, 2015) and PLATON (Spek, 2009).

6-Methoxy-N4-{2-[(4-methylbenzylidene)amino]phenyl}-5-nitrosopyrimidine-2,4-diamine dimethyl sulfoxide monosolvate (I) top
Crystal data top
C19H18N6O2·C2H6OSF(000) = 928
Mr = 440.52Dx = 1.372 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 10.801 (5) ÅCell parameters from 4914 reflections
b = 17.301 (8) Åθ = 2.1–27.6°
c = 11.777 (7) ŵ = 0.19 mm1
β = 104.28 (2)°T = 100 K
V = 2132.7 (19) Å3Block, green
Z = 40.22 × 0.22 × 0.17 mm
Data collection top
Bruker D8 Venture
diffractometer
4914 independent reflections
Radiation source: INCOATEC high brilliance microfocus sealed tube3658 reflections with I > 2σ(I)
Multilayer mirror monochromatorRint = 0.066
φ and ω scansθmax = 27.6°, θmin = 2.1°
Absorption correction: multi-scan
(SADABS; Bruker, 2016)
h = 1314
Tmin = 0.818, Tmax = 0.969k = 2222
20005 measured reflectionsl = 1515
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.043H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.099 w = 1/[σ2(Fo2) + (0.0366P)2 + 0.9653P]
where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
4914 reflectionsΔρmax = 0.44 e Å3
293 parametersΔρmin = 0.41 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.63176 (14)0.44867 (8)0.44069 (13)0.0120 (3)
C20.70798 (17)0.49327 (9)0.39280 (16)0.0119 (4)
N30.67939 (14)0.52579 (8)0.28358 (13)0.0126 (3)
C40.56203 (17)0.51537 (9)0.22182 (15)0.0124 (4)
C50.46824 (17)0.47089 (10)0.26155 (15)0.0124 (4)
C60.51361 (17)0.43704 (9)0.37651 (15)0.0113 (4)
N210.82477 (15)0.50708 (9)0.45704 (15)0.0140 (3)
H21A0.879 (2)0.5321 (11)0.4269 (18)0.017*
H21B0.8523 (19)0.4849 (11)0.5261 (19)0.017*
O410.52485 (12)0.54582 (7)0.11541 (11)0.0164 (3)
C410.62018 (18)0.58875 (11)0.07361 (17)0.0204 (4)
H41C0.68790.55350.06390.031*
H41A0.65700.62900.13060.031*
H41B0.58010.61280.00190.031*
N510.34929 (15)0.46832 (9)0.18987 (14)0.0172 (3)
O510.26510 (12)0.42777 (7)0.22353 (12)0.0199 (3)
N610.43163 (15)0.39245 (8)0.41667 (13)0.0115 (3)
H610.359 (2)0.3896 (11)0.3682 (18)0.014*
C610.44691 (17)0.35231 (9)0.52304 (15)0.0113 (4)
C620.34263 (17)0.30489 (10)0.53073 (16)0.0129 (4)
C630.34837 (18)0.26217 (10)0.63204 (17)0.0164 (4)
H630.27990.22870.63610.020*
C640.45325 (18)0.26823 (10)0.72687 (17)0.0172 (4)
H640.45660.23940.79620.021*
C650.55336 (18)0.31665 (10)0.71999 (16)0.0153 (4)
H650.62430.32170.78580.018*
C660.55184 (17)0.35804 (10)0.61841 (16)0.0136 (4)
H660.62210.39000.61430.016*
N620.23880 (14)0.30157 (8)0.43151 (13)0.0142 (3)
C770.12606 (17)0.31075 (9)0.44571 (16)0.0132 (4)
H770.11490.31870.52240.016*
C710.01410 (17)0.30927 (9)0.34622 (16)0.0122 (4)
C720.02521 (18)0.28960 (10)0.23395 (16)0.0148 (4)
H720.10610.27530.22230.018*
C730.08009 (18)0.29075 (10)0.14038 (17)0.0165 (4)
H730.07090.27720.06470.020*
C740.20049 (18)0.31150 (10)0.15462 (17)0.0155 (4)
C750.21199 (17)0.32966 (10)0.26681 (16)0.0149 (4)
H750.29340.34280.27840.018*
C760.10657 (17)0.32890 (9)0.36166 (16)0.0132 (4)
H760.11610.34170.43750.016*
C780.31356 (19)0.31587 (11)0.05064 (18)0.0230 (4)
H78A0.31570.36670.01360.034*
H78C0.39230.30810.07640.034*
H78B0.30640.27560.00590.034*
S210.97174 (4)0.59113 (2)0.22222 (4)0.01328 (11)
O211.01515 (12)0.57943 (7)0.35309 (11)0.0185 (3)
C210.94880 (19)0.49656 (10)0.15963 (19)0.0211 (4)
H21C1.02900.46750.18260.032*
H21D0.92250.50070.07400.032*
H21E0.88240.46970.18790.032*
C221.11243 (18)0.61524 (10)0.17569 (18)0.0189 (4)
H22C1.14590.66490.21000.028*
H22D1.09150.61910.09000.028*
H22E1.17700.57490.20150.028*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0118 (8)0.0123 (7)0.0124 (8)0.0001 (6)0.0038 (6)0.0005 (6)
C20.0131 (9)0.0100 (8)0.0134 (9)0.0006 (7)0.0045 (8)0.0013 (7)
N30.0130 (8)0.0134 (7)0.0121 (8)0.0014 (6)0.0046 (6)0.0005 (6)
C40.0149 (9)0.0123 (8)0.0110 (9)0.0041 (7)0.0052 (8)0.0004 (6)
C50.0132 (9)0.0131 (8)0.0112 (9)0.0018 (7)0.0034 (7)0.0007 (7)
C60.0140 (9)0.0088 (7)0.0123 (9)0.0005 (7)0.0052 (7)0.0026 (6)
N210.0124 (8)0.0175 (8)0.0126 (8)0.0027 (6)0.0043 (7)0.0023 (6)
O410.0154 (7)0.0218 (7)0.0122 (7)0.0003 (5)0.0038 (6)0.0047 (5)
C410.0174 (10)0.0288 (10)0.0163 (10)0.0004 (8)0.0063 (8)0.0088 (8)
N510.0145 (8)0.0209 (8)0.0164 (9)0.0003 (6)0.0041 (7)0.0001 (6)
O510.0117 (7)0.0268 (7)0.0205 (8)0.0032 (5)0.0026 (6)0.0020 (6)
N610.0093 (7)0.0140 (7)0.0106 (8)0.0007 (6)0.0014 (6)0.0001 (6)
C610.0122 (9)0.0103 (8)0.0126 (9)0.0027 (6)0.0053 (7)0.0002 (6)
C620.0113 (9)0.0138 (8)0.0145 (10)0.0003 (7)0.0045 (8)0.0020 (7)
C630.0143 (9)0.0154 (8)0.0211 (11)0.0015 (7)0.0075 (8)0.0016 (7)
C640.0166 (10)0.0194 (9)0.0169 (10)0.0022 (8)0.0066 (8)0.0057 (7)
C650.0139 (9)0.0192 (9)0.0121 (10)0.0024 (7)0.0020 (8)0.0000 (7)
C660.0118 (9)0.0135 (8)0.0164 (10)0.0008 (7)0.0053 (8)0.0014 (7)
N620.0111 (8)0.0152 (7)0.0159 (9)0.0031 (6)0.0025 (7)0.0007 (6)
C770.0157 (9)0.0105 (8)0.0149 (10)0.0019 (7)0.0064 (8)0.0007 (7)
C710.0113 (9)0.0088 (8)0.0160 (10)0.0015 (6)0.0028 (8)0.0013 (6)
C720.0140 (9)0.0142 (8)0.0179 (10)0.0015 (7)0.0072 (8)0.0004 (7)
C730.0213 (10)0.0158 (9)0.0134 (10)0.0024 (7)0.0066 (8)0.0016 (7)
C740.0161 (10)0.0116 (8)0.0176 (10)0.0006 (7)0.0019 (8)0.0033 (7)
C750.0111 (9)0.0118 (8)0.0221 (11)0.0009 (7)0.0048 (8)0.0017 (7)
C760.0153 (9)0.0099 (8)0.0155 (10)0.0004 (7)0.0059 (8)0.0007 (7)
C780.0203 (11)0.0265 (10)0.0194 (11)0.0011 (8)0.0002 (9)0.0049 (8)
S210.0120 (2)0.0138 (2)0.0145 (2)0.00037 (17)0.00398 (18)0.00120 (17)
O210.0175 (7)0.0238 (7)0.0143 (7)0.0023 (5)0.0039 (6)0.0032 (5)
C210.0210 (11)0.0156 (9)0.0283 (12)0.0048 (8)0.0091 (9)0.0044 (8)
C220.0184 (10)0.0154 (9)0.0259 (11)0.0016 (7)0.0111 (9)0.0022 (7)
Geometric parameters (Å, º) top
N1—C61.328 (2)C65—H650.9500
N1—C21.349 (2)C66—H660.9500
C2—N211.323 (2)N62—C771.279 (2)
C2—N31.368 (2)C77—C711.462 (3)
N3—C41.309 (2)C77—H770.9500
C4—O411.327 (2)C71—C721.399 (3)
C4—C51.439 (2)C71—C761.401 (3)
C5—N511.353 (2)C72—C731.375 (3)
C5—C61.445 (3)C72—H720.9500
C6—N611.345 (2)C73—C741.399 (3)
N21—H21A0.87 (2)C73—H730.9500
N21—H21B0.88 (2)C74—C751.393 (3)
O41—C411.451 (2)C74—C781.503 (3)
C41—H41C0.9800C75—C761.384 (3)
C41—H41A0.9800C75—H750.9500
C41—H41B0.9800C76—H760.9500
N51—O511.286 (2)C78—H78A0.9800
N61—C611.406 (2)C78—H78C0.9800
N61—H610.85 (2)C78—H78B0.9800
C61—C661.389 (3)S21—O211.5100 (16)
C61—C621.414 (2)S21—C211.7865 (19)
C62—C631.392 (3)S21—C221.787 (2)
C62—N621.407 (2)C21—H21C0.9800
C63—C641.385 (3)C21—H21D0.9800
C63—H630.9500C21—H21E0.9800
C64—C651.386 (3)C22—H22C0.9800
C64—H640.9500C22—H22D0.9800
C65—C661.391 (3)C22—H22E0.9800
C6—N1—C2116.64 (15)C65—C66—H66120.2
N21—C2—N1117.28 (17)C77—N62—C62118.41 (16)
N21—C2—N3115.21 (16)N62—C77—C71121.26 (17)
N1—C2—N3127.51 (17)N62—C77—H77119.4
C4—N3—C2115.41 (15)C71—C77—H77119.4
N3—C4—O41119.74 (16)C72—C71—C76118.75 (17)
N3—C4—C5123.76 (16)C72—C71—C77121.00 (17)
O41—C4—C5116.49 (16)C76—C71—C77120.25 (17)
N51—C5—C4116.80 (16)C73—C72—C71120.48 (17)
N51—C5—C6128.44 (16)C73—C72—H72119.8
C4—C5—C6114.71 (16)C71—C72—H72119.8
N1—C6—N61120.67 (16)C72—C73—C74121.16 (18)
N1—C6—C5121.86 (16)C72—C73—H73119.4
N61—C6—C5117.47 (16)C74—C73—H73119.4
C2—N21—H21A119.9 (14)C75—C74—C73118.34 (17)
C2—N21—H21B120.4 (13)C75—C74—C78121.12 (17)
H21A—N21—H21B119.0 (19)C73—C74—C78120.52 (18)
C4—O41—C41116.68 (14)C76—C75—C74121.00 (17)
O41—C41—H41C109.5C76—C75—H75119.5
O41—C41—H41A109.5C74—C75—H75119.5
H41C—C41—H41A109.5C75—C76—C71120.25 (17)
O41—C41—H41B109.5C75—C76—H76119.9
H41C—C41—H41B109.5C71—C76—H76119.9
H41A—C41—H41B109.5C74—C78—H78A109.5
O51—N51—C5117.41 (15)C74—C78—H78C109.5
C6—N61—C61130.83 (16)H78A—C78—H78C109.5
C6—N61—H61111.9 (13)C74—C78—H78B109.5
C61—N61—H61117.2 (13)H78A—C78—H78B109.5
C66—C61—N61125.34 (16)H78C—C78—H78B109.5
C66—C61—C62119.58 (16)O21—S21—C21105.95 (9)
N61—C61—C62115.04 (16)O21—S21—C22105.72 (9)
C63—C62—N62123.24 (16)C21—S21—C2297.42 (9)
C63—C62—C61119.68 (17)S21—C21—H21C109.5
N62—C62—C61117.04 (16)S21—C21—H21D109.5
C64—C63—C62120.38 (17)H21C—C21—H21D109.5
C64—C63—H63119.8S21—C21—H21E109.5
C62—C63—H63119.8H21C—C21—H21E109.5
C63—C64—C65119.57 (17)H21D—C21—H21E109.5
C63—C64—H64120.2S21—C22—H22C109.5
C65—C64—H64120.2S21—C22—H22D109.5
C64—C65—C66121.17 (18)H22C—C22—H22D109.5
C64—C65—H65119.4S21—C22—H22E109.5
C66—C65—H65119.4H22C—C22—H22E109.5
C61—C66—C65119.54 (17)H22D—C22—H22E109.5
C61—C66—H66120.2
C6—N1—C2—N21178.19 (15)N61—C61—C62—C63179.51 (16)
C6—N1—C2—N32.7 (2)C66—C61—C62—N62179.76 (15)
N21—C2—N3—C4176.88 (15)N61—C61—C62—N621.8 (2)
N1—C2—N3—C44.0 (2)N62—C62—C63—C64179.81 (16)
C2—N3—C4—O41178.97 (14)C61—C62—C63—C642.6 (3)
C2—N3—C4—C52.1 (2)C62—C63—C64—C650.6 (3)
N3—C4—C5—N51177.09 (16)C63—C64—C65—C661.5 (3)
O41—C4—C5—N513.9 (2)N61—C61—C66—C65178.21 (16)
N3—C4—C5—C60.6 (2)C62—C61—C66—C650.4 (3)
O41—C4—C5—C6178.40 (14)C64—C65—C66—C611.6 (3)
C2—N1—C6—N61179.07 (15)C63—C62—N62—C7750.9 (2)
C2—N1—C6—C50.5 (2)C61—C62—N62—C77131.48 (17)
N51—C5—C6—N1175.36 (16)C62—N62—C77—C71178.98 (14)
C4—C5—C6—N12.0 (2)N62—C77—C71—C726.9 (2)
N51—C5—C6—N615.0 (3)N62—C77—C71—C76172.06 (16)
C4—C5—C6—N61177.63 (14)C76—C71—C72—C731.0 (2)
N3—C4—O41—C410.8 (2)C77—C71—C72—C73177.95 (15)
C5—C4—O41—C41178.20 (15)C71—C72—C73—C740.0 (3)
C4—C5—N51—O51178.94 (15)C72—C73—C74—C751.2 (3)
C6—C5—N51—O513.8 (3)C72—C73—C74—C78177.29 (16)
N1—C6—N61—C610.5 (3)C73—C74—C75—C761.4 (2)
C5—C6—N61—C61179.90 (16)C78—C74—C75—C76177.11 (16)
C6—N61—C61—C667.8 (3)C74—C75—C76—C710.4 (2)
C6—N61—C61—C62174.29 (16)C72—C71—C76—C750.8 (2)
C66—C61—C62—C632.5 (2)C77—C71—C76—C75178.13 (15)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N21—H21A···O210.87 (2)2.05 (2)2.922 (3)173.7 (19)
N21—H21B···O21i0.88 (2)2.08 (2)2.885 (3)152.1 (19)
N61—H61···O510.85 (2)1.88 (2)2.601 (3)142.4 (19)
Symmetry code: (i) x+2, y+1, z+1.
N4-{2-[(Ethoxymethylidene)amino]phenyl}-6-methoxy-5-nitrosopyrimidine-2,4-diamine dimethyl sulfoxide monosolvate (III) top
Crystal data top
C14H16N6O3·C2H6OSF(000) = 832
Mr = 394.46Dx = 1.363 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 10.8498 (11) ÅCell parameters from 4608 reflections
b = 17.2238 (15) Åθ = 2.3–27.9°
c = 11.3806 (11) ŵ = 0.20 mm1
β = 115.351 (3)°T = 100 K
V = 1921.9 (3) Å3Block, brown
Z = 40.20 × 0.17 × 0.13 mm
Data collection top
Bruker D8 Venture
diffractometer
4606 independent reflections
Radiation source: INCOATEC high brilliance microfocus sealed tube3808 reflections with I > 2σ(I)
Multilayer mirror monochromatorRint = 0.066
φ and ω scansθmax = 27.9°, θmin = 2.3°
Absorption correction: multi-scan
(SADABS; Bruker, 2016)
h = 1414
Tmin = 0.935, Tmax = 0.974k = 2222
51879 measured reflectionsl = 1414
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.088 w = 1/[σ2(Fo2) + (0.0343P)2 + 1.3229P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
4606 reflectionsΔρmax = 0.35 e Å3
257 parametersΔρmin = 0.38 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.62364 (12)0.45133 (7)0.43599 (11)0.0132 (2)
C20.68864 (15)0.49854 (8)0.38650 (13)0.0134 (3)
N30.63374 (12)0.53671 (7)0.26896 (12)0.0134 (2)
C40.50414 (15)0.52505 (8)0.19766 (13)0.0124 (3)
C50.42094 (14)0.47440 (8)0.23492 (14)0.0124 (3)
C60.49167 (14)0.43866 (8)0.36181 (13)0.0116 (3)
N210.82050 (13)0.51041 (8)0.45783 (13)0.0181 (3)
H21A0.8645 (19)0.5371 (11)0.4248 (18)0.022*
H21B0.8638 (19)0.4833 (11)0.5284 (19)0.022*
O410.44084 (10)0.56004 (6)0.08289 (10)0.0156 (2)
C410.52208 (16)0.61220 (9)0.04430 (15)0.0181 (3)
H41A0.56630.65080.11280.027*
H41B0.46300.63860.03660.027*
H41C0.59180.58240.03070.027*
N510.29003 (13)0.46569 (7)0.14913 (12)0.0163 (3)
O510.21437 (11)0.42050 (6)0.18101 (11)0.0194 (2)
N610.41891 (13)0.39107 (7)0.40144 (12)0.0124 (2)
H610.3344 (19)0.3865 (10)0.3433 (17)0.015*
C610.45849 (15)0.34729 (8)0.51643 (13)0.0124 (3)
C620.35674 (15)0.29664 (8)0.51885 (14)0.0146 (3)
C630.38502 (17)0.25081 (9)0.62812 (15)0.0189 (3)
H630.31720.21660.63020.023*
C640.51191 (17)0.25470 (9)0.73433 (15)0.0204 (3)
H640.53080.22310.80850.024*
C650.61052 (17)0.30466 (9)0.73158 (15)0.0198 (3)
H650.69690.30720.80440.024*
C660.58482 (15)0.35135 (8)0.62337 (14)0.0154 (3)
H660.65310.38570.62270.018*
N620.23363 (13)0.29167 (7)0.40440 (12)0.0164 (3)
C670.12132 (17)0.29543 (9)0.41230 (16)0.0206 (3)
H670.12230.30440.49510.025*
O670.00062 (11)0.28728 (7)0.30906 (11)0.0233 (3)
C680.00766 (16)0.27278 (9)0.18557 (15)0.0195 (3)
H68A0.06640.22720.19350.023*
H68B0.04680.31840.16070.023*
C690.13509 (17)0.25776 (10)0.08446 (17)0.0275 (4)
H69A0.17280.21260.11010.041*
H69B0.13340.24760.00050.041*
H69C0.19210.30330.07700.041*
S210.89988 (4)0.57171 (2)0.18998 (3)0.01387 (9)
O210.97955 (11)0.57988 (6)0.33640 (10)0.0180 (2)
C210.88050 (17)0.46953 (9)0.15983 (15)0.0195 (3)
H21C0.97050.44480.19560.029*
H21D0.83450.46020.06590.029*
H21E0.82580.44750.20150.029*
C221.01965 (16)0.59012 (9)0.12422 (15)0.0192 (3)
H22A1.09800.55530.16500.029*
H22B1.05050.64410.14140.029*
H22C0.97620.58100.03020.029*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0145 (6)0.0141 (6)0.0125 (6)0.0005 (5)0.0071 (5)0.0011 (5)
C20.0148 (7)0.0140 (6)0.0127 (7)0.0001 (5)0.0072 (6)0.0008 (5)
N30.0141 (6)0.0145 (6)0.0134 (6)0.0002 (5)0.0076 (5)0.0016 (5)
C40.0158 (7)0.0107 (6)0.0129 (6)0.0025 (5)0.0084 (6)0.0010 (5)
C50.0133 (7)0.0116 (6)0.0135 (7)0.0020 (5)0.0068 (6)0.0002 (5)
C60.0142 (7)0.0091 (6)0.0135 (6)0.0017 (5)0.0079 (5)0.0012 (5)
N210.0135 (6)0.0261 (7)0.0137 (6)0.0038 (5)0.0049 (5)0.0056 (5)
O410.0151 (5)0.0167 (5)0.0152 (5)0.0004 (4)0.0068 (4)0.0065 (4)
C410.0191 (8)0.0197 (7)0.0177 (7)0.0007 (6)0.0099 (6)0.0073 (6)
N510.0147 (6)0.0161 (6)0.0189 (6)0.0003 (5)0.0079 (5)0.0034 (5)
O510.0137 (5)0.0217 (6)0.0229 (6)0.0020 (4)0.0078 (4)0.0066 (4)
N610.0125 (6)0.0128 (6)0.0132 (6)0.0008 (5)0.0066 (5)0.0016 (5)
C610.0180 (7)0.0103 (6)0.0123 (7)0.0021 (5)0.0098 (6)0.0003 (5)
C620.0196 (7)0.0113 (6)0.0159 (7)0.0004 (5)0.0107 (6)0.0018 (5)
C630.0275 (8)0.0136 (7)0.0205 (8)0.0033 (6)0.0151 (7)0.0003 (6)
C640.0307 (9)0.0168 (7)0.0164 (7)0.0017 (6)0.0128 (7)0.0044 (6)
C650.0218 (8)0.0228 (8)0.0148 (7)0.0030 (6)0.0079 (6)0.0036 (6)
C660.0179 (7)0.0155 (7)0.0157 (7)0.0012 (5)0.0100 (6)0.0019 (5)
N620.0201 (7)0.0123 (6)0.0180 (6)0.0040 (5)0.0094 (5)0.0001 (5)
C670.0234 (8)0.0205 (8)0.0209 (8)0.0058 (6)0.0124 (7)0.0011 (6)
O670.0189 (6)0.0295 (6)0.0234 (6)0.0061 (5)0.0110 (5)0.0007 (5)
C680.0214 (8)0.0174 (7)0.0198 (8)0.0038 (6)0.0091 (6)0.0015 (6)
C690.0233 (9)0.0284 (9)0.0258 (9)0.0049 (7)0.0057 (7)0.0030 (7)
S210.01340 (17)0.01437 (17)0.01379 (17)0.00099 (13)0.00578 (14)0.00251 (13)
O210.0193 (5)0.0197 (5)0.0136 (5)0.0035 (4)0.0058 (4)0.0016 (4)
C210.0228 (8)0.0141 (7)0.0204 (8)0.0020 (6)0.0081 (7)0.0003 (6)
C220.0196 (8)0.0210 (7)0.0208 (8)0.0004 (6)0.0122 (6)0.0022 (6)
Geometric parameters (Å, º) top
N1—C61.3324 (18)C64—C651.384 (2)
N1—C21.3476 (18)C64—H640.9500
C2—N211.3240 (19)C65—C661.395 (2)
C2—N31.3762 (18)C65—H650.9500
N3—C41.3034 (19)C66—H660.9500
C4—O411.3315 (17)N62—C671.261 (2)
C4—C51.4434 (19)C67—O671.341 (2)
C5—N511.3437 (19)C67—H670.9500
C5—C61.4506 (19)O67—C681.4613 (19)
C6—N611.3429 (18)C68—C691.505 (2)
N21—H21A0.86 (2)C68—H68A0.9900
N21—H21B0.87 (2)C68—H68B0.9900
O41—C411.4520 (17)C69—H69A0.9800
C41—H41A0.9800C69—H69B0.9800
C41—H41B0.9800C69—H69C0.9800
C41—H41C0.9800S21—O211.5200 (11)
N51—O511.2909 (16)S21—C221.7839 (15)
N61—C611.4087 (18)S21—C211.7883 (15)
N61—H610.874 (18)C21—H21C0.9800
C61—C661.392 (2)C21—H21D0.9800
C61—C621.417 (2)C21—H21E0.9800
C62—C631.392 (2)C22—H22A0.9800
C62—N621.414 (2)C22—H22B0.9800
C63—C641.391 (2)C22—H22C0.9800
C63—H630.9500
C6—N1—C2116.53 (12)C63—C64—H64120.1
N21—C2—N1117.28 (13)C64—C65—C66120.94 (15)
N21—C2—N3115.25 (13)C64—C65—H65119.5
N1—C2—N3127.47 (13)C66—C65—H65119.5
C4—N3—C2115.73 (12)C61—C66—C65119.52 (14)
N3—C4—O41120.45 (13)C61—C66—H66120.2
N3—C4—C5123.64 (13)C65—C66—H66120.2
O41—C4—C5115.91 (13)C67—N62—C62119.46 (13)
N51—C5—C4116.96 (13)N62—C67—O67122.90 (14)
N51—C5—C6128.32 (13)N62—C67—H67118.6
C4—C5—C6114.71 (12)O67—C67—H67118.6
N1—C6—N61120.93 (13)C67—O67—C68115.28 (12)
N1—C6—C5121.89 (12)O67—C68—C69107.72 (13)
N61—C6—C5117.18 (13)O67—C68—H68A110.2
C2—N21—H21A118.2 (13)C69—C68—H68A110.2
C2—N21—H21B119.8 (12)O67—C68—H68B110.2
H21A—N21—H21B120.6 (18)C69—C68—H68B110.2
C4—O41—C41116.86 (11)H68A—C68—H68B108.5
O41—C41—H41A109.5C68—C69—H69A109.5
O41—C41—H41B109.5C68—C69—H69B109.5
H41A—C41—H41B109.5H69A—C69—H69B109.5
O41—C41—H41C109.5C68—C69—H69C109.5
H41A—C41—H41C109.5H69A—C69—H69C109.5
H41B—C41—H41C109.5H69B—C69—H69C109.5
O51—N51—C5117.68 (12)O21—S21—C22105.61 (7)
C6—N61—C61130.50 (13)O21—S21—C21105.44 (7)
C6—N61—H61112.2 (11)C22—S21—C2198.13 (7)
C61—N61—H61117.3 (11)S21—C21—H21C109.5
C66—C61—N61125.45 (13)S21—C21—H21D109.5
C66—C61—C62119.86 (13)H21C—C21—H21D109.5
N61—C61—C62114.68 (13)S21—C21—H21E109.5
C63—C62—N62123.29 (13)H21C—C21—H21E109.5
C63—C62—C61119.42 (14)H21D—C21—H21E109.5
N62—C62—C61117.14 (13)S21—C22—H22A109.5
C64—C63—C62120.43 (14)S21—C22—H22B109.5
C64—C63—H63119.8H22A—C22—H22B109.5
C62—C63—H63119.8S21—C22—H22C109.5
C65—C64—C63119.82 (14)H22A—C22—H22C109.5
C65—C64—H64120.1H22B—C22—H22C109.5
C6—N1—C2—N21178.60 (13)N1—C6—N61—C610.6 (2)
C6—N1—C2—N31.5 (2)C5—C6—N61—C61178.58 (13)
N21—C2—N3—C4179.62 (13)C6—N61—C61—C667.5 (2)
N1—C2—N3—C40.5 (2)C6—N61—C61—C62173.40 (13)
C2—N3—C4—O41179.17 (12)C66—C61—C62—C630.7 (2)
C2—N3—C4—C51.4 (2)N61—C61—C62—C63179.83 (13)
N3—C4—C5—N51177.41 (13)C66—C61—C62—N62176.28 (12)
O41—C4—C5—N512.03 (19)N61—C61—C62—N624.55 (18)
N3—C4—C5—C62.1 (2)N62—C62—C63—C64175.50 (14)
O41—C4—C5—C6178.47 (12)C61—C62—C63—C640.2 (2)
C2—N1—C6—N61178.48 (12)C62—C63—C64—C650.2 (2)
C2—N1—C6—C50.65 (19)C63—C64—C65—C660.1 (2)
N51—C5—C6—N1178.46 (14)N61—C61—C66—C65179.82 (13)
C4—C5—C6—N10.97 (19)C62—C61—C66—C650.8 (2)
N51—C5—C6—N610.7 (2)C64—C65—C66—C610.4 (2)
C4—C5—C6—N61179.87 (12)C63—C62—N62—C6751.4 (2)
N3—C4—O41—C411.46 (19)C61—C62—N62—C67133.18 (15)
C5—C4—O41—C41179.08 (12)C62—N62—C67—O67176.57 (13)
C4—C5—N51—O51179.92 (12)N62—C67—O67—C680.6 (2)
C6—C5—N51—O510.5 (2)C67—O67—C68—C69174.70 (13)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N21—H21A···O210.86 (2)2.05 (2)2.8916 (19)168.7 (18)
N21—H21B···O21i0.87 (2)2.05 (2)2.8737 (18)157 (2)
N61—H61···O510.88 (2)1.841 (18)2.5899 (18)142.4 (18)
Symmetry code: (i) x+2, y+1, z+1.
Selected geometric parameters (Å, °) for compounds (I)–(III) top
Parameter(I)(II)(III)
N1—C21.349 (2)1.372 (3)1.3476 (18)
C2—N31.368 (2)1.353 (3)1.3762 (18)
N3—C41.309 (2)1.310 (3)1.3034 (19)
C4—C51.439 (2)1.436 (3)1.4434 (19)
C5—C61.445 (2)1.404 (3)1.4506 (19)
C6—N11.328 (2)1.322 (3)1.3324 (18)
C2—N211.323 (2)1.320 (3)1.3240 (19)
C5—N511.353 (2)1.401 (3)1.3437 (19)
N51—O511.286 (2)1.215 (3)1.2909 (16)
C6—N611.345 (2)1.417 (3)1.3429 (18)
N61—C611.406 (2)1.4087 (18)
C62—N621.407 (2)1.414 (2)
N62—C671.261 (2)
N62—C771.279 (2)
Δ0.0670.1860.0528
C4—C5—N51—O51178.94 (15)0.1 (3)178.58 (13)
C6—N61—C61—C62-174.29 (16)-173.40 (13)
C61—C62—N62—C67-133.18 (15)
C62—N62—C67—O67-176.57 (13)
N62—C67—O67—C680.6 (2)
C67—O67—C68—C69174.70 (13)
C61—C62—N62—C77-131.38 (17)
C62—N62—C77—C71178.98 (14)
N62—C77—C71—C726.9 (2)
C77—C71—C72—C73-177.96 (15)
Note: Δ = [d(C5—N51) – d(N51—O51)].
Hydrogen-bond parameters (Å, °) for compounds (I)–(III) top
CompoundD—H···AD—HH···AD···AD—H···A
(I)N21—H21A···O210.87 (2)2.05 (2)2.922 (3)173.7 (19)
N21—H21B···O21i0.88 (2)2.08 (2)2.885 (3)152.1 (19)
N61—H61···O510.85 (2)1.88 (2)2.601 (3)142.4 (19)
(II)N21—H21A···N1ii0.91 (3)2.24 (2)3.145 (4)176 (2)
N21—H21B···N63iii0.88 (3)2.08 (3)2.936 (4)166 (2)
C625—H625···O51iv0.952.593.485 (5)157
(III)N21—H21A···O210.86 (2)2.05 (2)2.8916 (19)168.7 (18)
N21—H21B···O21i0.86 (2)2.05 (2)2.8737 (18)157 (2)
N61—H61···O510.88 (2)1.841 (18)2.5899 (18)142.4 (18)
Symmetry codes: (i) -x+2, -y+1, -z+1; (ii) -x+1, -y+1, -z+1; (iii) x, y+1, z; (iv) -x+1, -y, -z+2.
 

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