organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Volume 70| Part 2| February 2014| Pages o217-o218

1-Aza­niumyl­cyclo­butane-1-carboxyl­ate monohydrate

aDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA, bDepartment of Chemistry, Catholic University of America, Washington, DC 20064, USA, cNASA Johnson Space Center, Astromaterial and Exploration Science Directorate, Houston, TX 77058, USA, and dSolar System Exploration Division, NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA
*Correspondence e-mail: rbutcher99@yahoo.com

(Received 25 November 2013; accepted 8 December 2013; online 29 January 2014)

In the title compound, C5H9NO2·H2O, the amino acid is in the usual zwitterionic form involving the α-carboxyl­ate group. The cyclo­butane backbone of the amino acid is disordered over two conformations, with occupancies of 0.882 (7) and 0.118 (7). In the crystal, N—H⋯O and O—H⋯O hydrogen bonds link the zwitterions [with the water molecule involved as both acceptor (with the NH3+) and donor (through a single carboxylate O from two different aminocyclobutane carb­oxylate moities)], resulting in a two-dimensional layered structure lying parallel to (100).

Related literature

For the eighty amino acids that have been detected in meteorites or comets, see: Burton et al. (2012[Burton, A. S., Stern, J. C., Elsila, J. E., Dworkin, J. P. & Glavin, D. P. (2012). Chem. Soc. Rev. 41, 5459-5472.]); Pizzarello et al. (2004[Pizzarello, S., Huang, Y. & Fuller, M. (2004). Geochim. Cosmochim. Acta, 68, 4963-4969.]), (2006[Pizzarello, S., Cooper, G. W. & Flynn, G. J. (2006). The Nature and Distribution of the Organic Material in Carbonaceous Chondrites and Interplanetary Dust Particles in Meteorites and the Early Solar System II. edited by D. Lauretta, L. A. Leshin & H. Y.McSween Jr. Tucson: University of Arizona Press.]). For the role of the H atom on the α-C atom in enhancing the rate of racemization, see: Yamada et al. (1983[Yamada, S., Hongo, C., Yoshioka, R. & Chibata, I. (1983). J. Org. Chem. 48, 843-846.]). For the mechanism of racemization of amino acids lacking an α-H atom, see: Pizzarello & Groy (2011[Pizzarello, S. & Groy, T. L. (2011). Geochim. Cosmochim. Acta, 75, 645-656.]). For the role that crystallization can play in the enrichment of L-isovaline and its structure, see: Butcher et al. (2013[Butcher, R. J., Brewer, G., Burton, A. S. & Dworkin, J. P. (2013). Acta Cryst. E69, o1829-o1830.]). For normal bond lengths and angles, see: Orpen (1993[Orpen, G. A. (1993). Chem. Soc. Rev. 22, 191-197.]). For the hydro­chloride salt of the title compound and related non-proteinogenic amino acids, see: Chacko & Zand (1975[Chacko, K. K. & Zand, R. (1975). Cryst. Struct. Commun. 4, 17-19.]); Butcher et al. (2013[Butcher, R. J., Brewer, G., Burton, A. S. & Dworkin, J. P. (2013). Acta Cryst. E69, o1829-o1830.]); Brewer et al. (2013[Brewer, G., Burton, A. S., Dworkin, J. P. & Butcher, R. J. (2013). Acta Cryst. E69, o1856-o1857.]). For conformational studies on model proteins with 1-amino­cyclo­butane-1-carb­oxy­lic acid residues, see: Balaji et al. (1995[Balaji, V. N., Ramnarayan, K., Chan, M. F. & Roa, S. N. (1995). Pept. Res. 8, 178-86.]). For involvement of the title compound in ethyl­ene production that leads to the ripening and spoilage of fruit, see: Nakatsuka et al. (1998[Nakatsuka, A., Murachi, S. & Okunishi, H. (1998). Plant Physiol. 118, 1295-1305.]); Bulantseva et al. (2003[Bulantseva, E. A., Glinka, E. M., Protsenko, M. A. & Sal'kova, E. G. (2003). Prikl. Biokhim. Mikrobiol. 39, 461-464.]).

[Scheme 1]

Experimental

Crystal data
  • C5H9NO2·H2O

  • Mr = 133.15

  • Monoclinic, P 21 /c

  • a = 10.25082 (19) Å

  • b = 6.13117 (9) Å

  • c = 10.9209 (2) Å

  • β = 100.8735 (18)°

  • V = 674.05 (2) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 0.92 mm−1

  • T = 123 K

  • 0.41 × 0.34 × 0.16 mm

Data collection
  • Agilent Xcalibur (Ruby, Gemini) diffractometer

  • Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012[Agilent (2012). Agilent Technologies UK Ltd, Yarnton, England.]) Tmin = 0.784, Tmax = 1.000

  • 4405 measured reflections

  • 1400 independent reflections

  • 1360 reflections with I > 2σ(I)

  • Rint = 0.022

Refinement
  • R[F2 > 2σ(F2)] = 0.038

  • wR(F2) = 0.103

  • S = 1.06

  • 1400 reflections

  • 119 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.36 e Å−3

  • Δρmin = −0.19 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
O1W—H1W1⋯O1i 0.87 (2) 1.92 (2) 2.7935 (12) 175.2 (18)
O1W—H1W2⋯O2ii 0.82 (2) 2.01 (2) 2.8268 (12) 175.7 (19)
N1—H1N⋯O2iii 0.922 (18) 1.923 (18) 2.8087 (12) 160.6 (15)
N1—H2N⋯O1iv 0.930 (17) 1.913 (17) 2.8351 (12) 171.2 (14)
N1—H3N⋯O1W 0.902 (17) 1.895 (17) 2.7673 (13) 162.3 (15)
Symmetry codes: (i) [x, -y+{\script{1\over 2}}, z+{\script{1\over 2}}]; (ii) [-x, y-{\script{1\over 2}}, -z+{\script{1\over 2}}]; (iii) [-x, y+{\script{1\over 2}}, -z+{\script{1\over 2}}]; (iv) [x, -y+{\script{3\over 2}}, z+{\script{1\over 2}}].

Data collection: CrysAlis PRO (Agilent, 2012[Agilent (2012). Agilent Technologies UK Ltd, Yarnton, England.]); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: SHELXTL (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); software used to prepare material for publication: SHELXTL.

Supporting information


Comment top

The alpha amino acids are essential for life as they are the building blocks of all proteins and enzymes. Nature uses almost exclusively the L form of the nineteen common chiral amino acids. The title compound is achiral due to the symmetry of the alpha carbon atom. It also lacks a hydrogen atom on the alpha carbon atom, which is critical in the racemization of the proteinogenic amino acids (Yamada et al., 1983). Little is known about the mechanism of racemization of amino acids lacking an alpha hydrogen atom (Pizzarello & Groy, 2011). Mechanistic investigation of racemization pathways of appropriate derivatives of the title compound may shed light on the racemization of this class of amino acids. Over eighty amino acids that have been identified in meteorites (Burton et al., 2012; Pizzarello et al., 2006). The title compound has not been detected to date in extraterrestrial sources but a higher analog, cycloleucine, has been reported (Pizzarello et al., 2004). The title compound has been incorporated into peptides for conformational studies on model proteins with 1-aminocyclobutane-1-carboxylic acid residues (Balaji et al., 1995). In addition the title compound has been shown to inhibit the enzyme 1-aminocyclopropane-1-carboxylate synthase, part of the pathway for ethylene production that leads to the ripening and spoilage of fruit (Nakatsuka et al., 1998; Bulantseva et al., 2003). The structures of some related non-proteinogenic amino acids have recently been reported (Butcher et al., 2013; Brewer, et al., 2013).

The structure of the title compound has not been reported to the CCDC but there is a report of its hydrochloride salt as a monohydrate (Chacko & Zand, 1975). In the structure of the title compound the amino acid is in the usual zwitterionic form involving the α carboxylate group and all the the bond lengths and angles are in the normal range for such compounds (Orpen, 1993). The metrical parameters of the title compound and its hydrochloride salt do not differ significantly apart from the C—O bond lengths which are equivalent in the title compound but differ significantly in the hydrochloride salt. The cyclobutane backbone of the amino-acid is disordered over two conformations with occupancies of 0.882 (7) and 0.118 (7). There is extensive N—H···O and O—H···O hydrogen bonding (Table 1) linking the zwitterions into a two-dimensional layered structure lying parallel to (100) (Fig. 2).

Related literature top

For the eighty amino acids that have been detected in meteorites or comets, see: Burton et al. (2012); Pizzarello et al. (2004), (2006). For the role of the H atom on the α-C atom in enhancing the rate of racemization, see: Yamada et al. (1983). For the mechanism of racemization of amino acids lacking an α-H atom, see: Pizzarello & Groy (2011). For the role that crystallization can play in the enrichment of L-isovaline and its structure, see: Butcher et al. (2013). For normal bond lengths and angles, see: Orpen (1993). For the hydrochloride salt of the title compound and related non-proteinogenic amino acids, see: Chacko & Zand (1975); Butcher et al. (2013); Brewer et al. (2013). For conformational studies on model proteins with 1-aminocyclobutane-1-carboxylic acid residues, see: Balaji et al. (1995). For involvement of the title compound in ethylene production that leads to the ripening and spoilage of fruit, see: Nakatsuka et al. (1998); Bulantseva et al. (2003).

Experimental top

1-Aminocyclobutane carboxylic acid was purchased from Sigma Aldrich. Crystals of the title compound were grown by evaporation from an aqueous solution of the achiral amino acid.

Refinement top

H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms with a C—H distances of 0.98 and 0.99 Å. The protons on the N and O were refined isotropically with the O—H distances for the water H's constrained to be 0.82 Å and the H—O—H angle close to 104.5°. The cyclobutane backbone of the amino-acid was disordered over two conformations with occupancies of 0.882 (7) and 0.118 (7).

Structure description top

The alpha amino acids are essential for life as they are the building blocks of all proteins and enzymes. Nature uses almost exclusively the L form of the nineteen common chiral amino acids. The title compound is achiral due to the symmetry of the alpha carbon atom. It also lacks a hydrogen atom on the alpha carbon atom, which is critical in the racemization of the proteinogenic amino acids (Yamada et al., 1983). Little is known about the mechanism of racemization of amino acids lacking an alpha hydrogen atom (Pizzarello & Groy, 2011). Mechanistic investigation of racemization pathways of appropriate derivatives of the title compound may shed light on the racemization of this class of amino acids. Over eighty amino acids that have been identified in meteorites (Burton et al., 2012; Pizzarello et al., 2006). The title compound has not been detected to date in extraterrestrial sources but a higher analog, cycloleucine, has been reported (Pizzarello et al., 2004). The title compound has been incorporated into peptides for conformational studies on model proteins with 1-aminocyclobutane-1-carboxylic acid residues (Balaji et al., 1995). In addition the title compound has been shown to inhibit the enzyme 1-aminocyclopropane-1-carboxylate synthase, part of the pathway for ethylene production that leads to the ripening and spoilage of fruit (Nakatsuka et al., 1998; Bulantseva et al., 2003). The structures of some related non-proteinogenic amino acids have recently been reported (Butcher et al., 2013; Brewer, et al., 2013).

The structure of the title compound has not been reported to the CCDC but there is a report of its hydrochloride salt as a monohydrate (Chacko & Zand, 1975). In the structure of the title compound the amino acid is in the usual zwitterionic form involving the α carboxylate group and all the the bond lengths and angles are in the normal range for such compounds (Orpen, 1993). The metrical parameters of the title compound and its hydrochloride salt do not differ significantly apart from the C—O bond lengths which are equivalent in the title compound but differ significantly in the hydrochloride salt. The cyclobutane backbone of the amino-acid is disordered over two conformations with occupancies of 0.882 (7) and 0.118 (7). There is extensive N—H···O and O—H···O hydrogen bonding (Table 1) linking the zwitterions into a two-dimensional layered structure lying parallel to (100) (Fig. 2).

For the eighty amino acids that have been detected in meteorites or comets, see: Burton et al. (2012); Pizzarello et al. (2004), (2006). For the role of the H atom on the α-C atom in enhancing the rate of racemization, see: Yamada et al. (1983). For the mechanism of racemization of amino acids lacking an α-H atom, see: Pizzarello & Groy (2011). For the role that crystallization can play in the enrichment of L-isovaline and its structure, see: Butcher et al. (2013). For normal bond lengths and angles, see: Orpen (1993). For the hydrochloride salt of the title compound and related non-proteinogenic amino acids, see: Chacko & Zand (1975); Butcher et al. (2013); Brewer et al. (2013). For conformational studies on model proteins with 1-aminocyclobutane-1-carboxylic acid residues, see: Balaji et al. (1995). For involvement of the title compound in ethylene production that leads to the ripening and spoilage of fruit, see: Nakatsuka et al. (1998); Bulantseva et al. (2003).

Computing details top

Data collection: CrysAlis PRO (Agilent, 2012); cell refinement: CrysAlis PRO (Agilent, 2012); data reduction: CrysAlis PRO (Agilent, 2012); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. Fif. 1. Diagram of the title compound showing atom labeling. Atomic displacement parameters are at the 30% probability level. The disorder in the backbone is shown with atoms in the the minor component connected with unfilled bonds. Hydrogen bonds are shown as dashed lines.
[Figure 2] Fig. 2. Packing diagram of the title compound (major component only) viewed along the b axis showing the N—H···O and O—H···O hydrogen bonds as dashed lines.
1-Azaniumylcyclobutane-1-carboxylate monohydrate top
Crystal data top
C5H9NO2·H2OF(000) = 288
Mr = 133.15Dx = 1.312 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 4146 reflections
a = 10.25082 (19) Åθ = 4.1–77.2°
b = 6.13117 (9) ŵ = 0.92 mm1
c = 10.9209 (2) ÅT = 123 K
β = 100.8735 (18)°Prism, colorless
V = 674.05 (2) Å30.41 × 0.34 × 0.16 mm
Z = 4
Data collection top
Agilent Xcalibur (Ruby, Gemini)
diffractometer
1400 independent reflections
Radiation source: Enhance (Cu) X-ray source1360 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
Detector resolution: 10.5081 pixels mm-1θmax = 77.4°, θmin = 8.3°
ω scansh = 1212
Absorption correction: multi-scan
(CrysAlis PRO; Agilent, 2012)
k = 67
Tmin = 0.784, Tmax = 1.000l = 1313
4405 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.038H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.103 w = 1/[σ2(Fo2) + (0.0616P)2 + 0.2169P]
where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
1400 reflectionsΔρmax = 0.36 e Å3
119 parametersΔρmin = 0.19 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.016 (4)
Crystal data top
C5H9NO2·H2OV = 674.05 (2) Å3
Mr = 133.15Z = 4
Monoclinic, P21/cCu Kα radiation
a = 10.25082 (19) ŵ = 0.92 mm1
b = 6.13117 (9) ÅT = 123 K
c = 10.9209 (2) Å0.41 × 0.34 × 0.16 mm
β = 100.8735 (18)°
Data collection top
Agilent Xcalibur (Ruby, Gemini)
diffractometer
1400 independent reflections
Absorption correction: multi-scan
(CrysAlis PRO; Agilent, 2012)
1360 reflections with I > 2σ(I)
Tmin = 0.784, Tmax = 1.000Rint = 0.022
4405 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0380 restraints
wR(F2) = 0.103H atoms treated by a mixture of independent and constrained refinement
S = 1.06Δρmax = 0.36 e Å3
1400 reflectionsΔρmin = 0.19 e Å3
119 parameters
Special details top

Experimental. Absorption correction: CrysAlisPro (Agilent, 2012) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
O1W0.11907 (10)0.30045 (14)0.47599 (9)0.0268 (3)
H1W10.1576 (18)0.203 (3)0.5293 (18)0.037 (4)*
H1W20.0713 (19)0.231 (3)0.4210 (19)0.039 (5)*
O20.04488 (8)0.54177 (13)0.20493 (7)0.0218 (3)
O10.23745 (8)0.52875 (13)0.13611 (7)0.0213 (3)
N10.13993 (9)0.73526 (15)0.41449 (8)0.0159 (3)
H1N0.0661 (18)0.809 (3)0.3735 (16)0.032 (4)*
H2N0.1799 (15)0.815 (3)0.4840 (15)0.023 (4)*
H3N0.1179 (16)0.603 (3)0.4404 (15)0.026 (4)*
C10.16664 (10)0.57917 (16)0.21410 (9)0.0155 (3)
C20.23577 (10)0.70405 (17)0.32992 (9)0.0151 (3)
C30.30893 (12)0.9136 (2)0.30010 (12)0.0247 (3)
H3A0.2845 (16)0.967 (3)0.2165 (16)0.030*
H3B0.3019 (16)1.021 (3)0.3606 (16)0.030*
C4A0.44072 (14)0.7839 (3)0.32757 (17)0.0353 (6)0.882 (7)
H4AA0.47060.73090.25180.042*0.882 (7)
H4AB0.51340.86070.38370.042*0.882 (7)
C4B0.4308 (11)0.845 (2)0.3984 (14)0.0353 (6)0.118
H4BA0.43660.91760.48020.042*0.118 (7)
H4BB0.51620.85430.36890.042*0.118 (7)
C50.37127 (10)0.6082 (2)0.39333 (11)0.0228 (3)
H5A0.3873 (16)0.464 (3)0.3693 (15)0.027*
H5B0.3840 (16)0.615 (3)0.4822 (16)0.027*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O1W0.0356 (5)0.0181 (4)0.0236 (5)0.0006 (3)0.0028 (4)0.0030 (3)
O20.0172 (4)0.0236 (5)0.0229 (4)0.0017 (3)0.0010 (3)0.0053 (3)
O10.0237 (4)0.0252 (5)0.0150 (4)0.0027 (3)0.0035 (3)0.0017 (3)
N10.0166 (5)0.0170 (5)0.0139 (5)0.0002 (3)0.0023 (3)0.0002 (3)
C10.0186 (5)0.0131 (5)0.0134 (5)0.0021 (4)0.0006 (4)0.0021 (4)
C20.0143 (5)0.0163 (5)0.0141 (5)0.0002 (4)0.0017 (4)0.0004 (4)
C30.0271 (6)0.0214 (6)0.0273 (6)0.0085 (4)0.0098 (5)0.0027 (5)
C4A0.0195 (8)0.0404 (10)0.0476 (11)0.0086 (6)0.0105 (7)0.0069 (7)
C4B0.0195 (8)0.0404 (10)0.0476 (11)0.0086 (6)0.0105 (7)0.0069 (7)
C50.0148 (5)0.0313 (7)0.0204 (6)0.0039 (4)0.0018 (4)0.0033 (4)
Geometric parameters (Å, º) top
O1W—H1W10.87 (2)C3—C4A1.547 (2)
O1W—H1W20.82 (2)C3—H3A0.958 (17)
O2—C11.2543 (13)C3—H3B0.943 (18)
O1—C11.2574 (13)C4A—C51.542 (2)
N1—C21.4823 (13)C4A—H4AA0.9900
N1—H1N0.922 (18)C4A—H4AB0.9900
N1—H2N0.930 (17)C4B—C51.570 (12)
N1—H3N0.902 (17)C4B—H4BA0.9900
C1—C21.5330 (14)C4B—H4BB0.9900
C2—C51.5465 (14)C5—H5A0.942 (17)
C2—C31.5527 (15)C5—H5B0.956 (17)
C3—C4B1.545 (13)
H1W1—O1W—H1W2105.5 (18)C2—C3—H3B108.9 (10)
C2—N1—H1N109.9 (11)H3A—C3—H3B112.9 (14)
C2—N1—H2N109.5 (9)C5—C4A—C389.22 (9)
H1N—N1—H2N109.6 (14)C5—C4A—H4AA113.8
C2—N1—H3N108.3 (10)C3—C4A—H4AA113.8
H1N—N1—H3N111.2 (15)C5—C4A—H4AB113.8
H2N—N1—H3N108.2 (14)C3—C4A—H4AB113.8
O2—C1—O1126.43 (10)H4AA—C4A—H4AB111.0
O2—C1—C2117.09 (9)C3—C4B—C588.3 (6)
O1—C1—C2116.46 (9)C3—C4B—H4BA113.9
N1—C2—C1108.72 (8)C5—C4B—H4BA113.9
N1—C2—C5114.52 (8)C3—C4B—H4BB113.9
C1—C2—C5114.58 (9)C5—C4B—H4BB113.9
N1—C2—C3115.28 (9)H4BA—C4B—H4BB111.1
C1—C2—C3113.99 (9)C4A—C5—C288.88 (9)
C5—C2—C388.84 (8)C2—C5—C4B88.6 (4)
C4B—C3—C289.3 (4)C4A—C5—H5A113.8 (10)
C4A—C3—C288.44 (9)C2—C5—H5A114.8 (10)
C4B—C3—H3A142.0 (11)C4B—C5—H5A141.8 (11)
C4A—C3—H3A115.0 (10)C4A—C5—H5B117.2 (9)
C2—C3—H3A115.6 (10)C2—C5—H5B112.2 (10)
C4B—C3—H3B82.1 (12)C4B—C5—H5B86.9 (11)
C4A—C3—H3B113.6 (10)H5A—C5—H5B109.0 (14)
O2—C1—C2—N15.49 (13)C2—C3—C4A—C516.15 (9)
O1—C1—C2—N1176.10 (9)C4A—C3—C4B—C571.5 (8)
O2—C1—C2—C5135.05 (10)C2—C3—C4B—C516.8 (5)
O1—C1—C2—C546.54 (13)C3—C4A—C5—C216.21 (10)
O2—C1—C2—C3124.62 (10)C3—C4A—C5—C4B72.9 (8)
O1—C1—C2—C353.79 (13)N1—C2—C5—C4A133.55 (10)
N1—C2—C3—C4B99.7 (6)C1—C2—C5—C4A99.82 (11)
C1—C2—C3—C4B133.6 (6)C3—C2—C5—C4A16.16 (10)
C5—C2—C3—C4B17.0 (6)N1—C2—C5—C4B100.6 (6)
N1—C2—C3—C4A132.80 (10)C1—C2—C5—C4B132.7 (6)
C1—C2—C3—C4A100.42 (11)C3—C2—C5—C4B16.8 (6)
C5—C2—C3—C4A16.10 (10)C3—C4B—C5—C4A73.3 (8)
C4B—C3—C4A—C574.9 (8)C3—C4B—C5—C216.9 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O1i0.87 (2)1.92 (2)2.7935 (12)175.2 (18)
O1W—H1W2···O2ii0.82 (2)2.01 (2)2.8268 (12)175.7 (19)
N1—H1N···O2iii0.922 (18)1.923 (18)2.8087 (12)160.6 (15)
N1—H2N···O1iv0.930 (17)1.913 (17)2.8351 (12)171.2 (14)
N1—H3N···O1W0.902 (17)1.895 (17)2.7673 (13)162.3 (15)
Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x, y1/2, z+1/2; (iii) x, y+1/2, z+1/2; (iv) x, y+3/2, z+1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O1i0.87 (2)1.92 (2)2.7935 (12)175.2 (18)
O1W—H1W2···O2ii0.82 (2)2.01 (2)2.8268 (12)175.7 (19)
N1—H1N···O2iii0.922 (18)1.923 (18)2.8087 (12)160.6 (15)
N1—H2N···O1iv0.930 (17)1.913 (17)2.8351 (12)171.2 (14)
N1—H3N···O1W0.902 (17)1.895 (17)2.7673 (13)162.3 (15)
Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x, y1/2, z+1/2; (iii) x, y+1/2, z+1/2; (iv) x, y+3/2, z+1/2.
 

Acknowledgements

RJB wishes to acknowledge the NSF–MRI program (grant CHE-0619278) for funds to purchase the diffractometer. GB wishes to acknowledge support of this work from NASA (NNX10AK71A)

References

First citationAgilent (2012). Agilent Technologies UK Ltd, Yarnton, England.  Google Scholar
First citationBalaji, V. N., Ramnarayan, K., Chan, M. F. & Roa, S. N. (1995). Pept. Res. 8, 178–86.  CAS PubMed Web of Science Google Scholar
First citationBrewer, G., Burton, A. S., Dworkin, J. P. & Butcher, R. J. (2013). Acta Cryst. E69, o1856–o1857.  CSD CrossRef CAS IUCr Journals Google Scholar
First citationBulantseva, E. A., Glinka, E. M., Protsenko, M. A. & Sal'kova, E. G. (2003). Prikl. Biokhim. Mikrobiol. 39, 461–464.  PubMed CAS Google Scholar
First citationBurton, A. S., Stern, J. C., Elsila, J. E., Dworkin, J. P. & Glavin, D. P. (2012). Chem. Soc. Rev. 41, 5459–5472.  Web of Science CrossRef CAS PubMed Google Scholar
First citationButcher, R. J., Brewer, G., Burton, A. S. & Dworkin, J. P. (2013). Acta Cryst. E69, o1829–o1830.  CSD CrossRef CAS IUCr Journals Google Scholar
First citationChacko, K. K. & Zand, R. (1975). Cryst. Struct. Commun. 4, 17–19.  CAS Google Scholar
First citationNakatsuka, A., Murachi, S. & Okunishi, H. (1998). Plant Physiol. 118, 1295–1305.  Web of Science CrossRef CAS PubMed Google Scholar
First citationOrpen, G. A. (1993). Chem. Soc. Rev. 22, 191–197.  CrossRef CAS Web of Science Google Scholar
First citationPizzarello, S., Cooper, G. W. & Flynn, G. J. (2006). The Nature and Distribution of the Organic Material in Carbonaceous Chondrites and Interplanetary Dust Particles in Meteorites and the Early Solar System II. edited by D. Lauretta, L. A. Leshin & H. Y.McSween Jr. Tucson: University of Arizona Press.  Google Scholar
First citationPizzarello, S. & Groy, T. L. (2011). Geochim. Cosmochim. Acta, 75, 645–656.  Web of Science CSD CrossRef CAS Google Scholar
First citationPizzarello, S., Huang, Y. & Fuller, M. (2004). Geochim. Cosmochim. Acta, 68, 4963–4969.  Web of Science CrossRef CAS Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationYamada, S., Hongo, C., Yoshioka, R. & Chibata, I. (1983). J. Org. Chem. 48, 843–846.  CrossRef CAS Web of Science Google Scholar

This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Volume 70| Part 2| February 2014| Pages o217-o218
Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds