organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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ISSN: 2056-9890

Bis(4H-1,2,4-triazol-3-yl)disulfane

aDepartment of Chemistry, JingGangShan University, Ji'an, Jiangxi 343009, People's Republic of China
*Correspondence e-mail: liudongsheng@jgsu.edu.cn

(Received 30 October 2007; accepted 4 December 2007; online 12 December 2007)

The title compound, C4H4N6S2, was synthesized by the reaction of 3-mercapto-1H-1,2,4-triazole with sodium hydrox­ide in ethanol. The mol­ecule possesses a crystallographically imposed twofold axis. Inter­molecular N—H⋯N hydrogen bonds link the mol­ecules into chains along the c axis.

Related literature

For related literature, see: De Luca (2006[De Luca, L. (2006). Curr. Med. Chem. 13, 1-23.]); Di Santo, Tafi, Costi, Botta, Artico, Corelli, Forte, Caporuscio, Angiolella & Palamara (2005[Di Santo, R., Tafi, A., Costi, R., Botta, M., Artico, M., Corelli, F., Forte, M., Caporuscio, F., Angiolella, L. & Palamara, A. T. (2005). J. Med. Chem. 48, 5140-5153.]); Fringuelli et al. (2005[Fringuelli, R., Milanese, L. & Schiaffella, F. (2005). Mini-Rev. Med. Chem. 5, 1061-1073.]); Menozzi et al. (2004[Menozzi, G., Merello, L., Fossa, P., Schenone, S., Ranise, A., Mosti, L., Bondavalli, F., Loddo, R., Murgioni, C., Mascia, V., La Colla, P. & Tamburini, E. (2004). Bioorg. Med. Chem. 12, 5465-5483.]).

[Scheme 1]

Experimental

Crystal data
  • C4H4N6S2

  • Mr = 200.25

  • Monoclinic, C 2/c

  • a = 14.052 (3) Å

  • b = 6.4044 (13) Å

  • c = 9.928 (2) Å

  • β = 122.18 (3)°

  • V = 756.2 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.65 mm−1

  • T = 293 (2) K

  • 0.12 × 0.09 × 0.06 mm

Data collection
  • Rigaku R-AXIS RAPID IP diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995[Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan.]) Tmin = 0.932, Tmax = 0.962

  • 3518 measured reflections

  • 859 independent reflections

  • 742 reflections with I > 2σ(I)

  • Rint = 0.035

Refinement
  • R[F2 > 2σ(F2)] = 0.029

  • wR(F2) = 0.081

  • S = 1.09

  • 859 reflections

  • 63 parameters

  • All H-atom parameters refined

  • Δρmax = 0.25 e Å−3

  • Δρmin = −0.22 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯N3i 0.89 (2) 1.97 (2) 2.8617 (19) 174.9 (19)
Symmetry code: (i) [x, -y+1, z+{\script{1\over 2}}].

Data collection: RAPID-AUTO (Rigaku, 1998[Rigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan.]); cell refinement: RAPID-AUTO (Rigaku, 1998[Rigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan.]); data reduction: RAPID-AUTO (Rigaku, 1998[Rigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan.]); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997[Sheldrick, G. M. (1997). SHELXL97 and SHELXS97. University of Göttingen, Germany.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997[Sheldrick, G. M. (1997). SHELXL97 and SHELXS97. University of Göttingen, Germany.]); molecular graphics: SHELXTL/PC (Sheldrick, 1993[Sheldrick, G. M. (1993). SHELXTL/PC. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA.]); software used to prepare material for publication: SHELXL97 (Sheldrick,1997[Sheldrick, G. M. (1997). SHELXL97 and SHELXS97. University of Göttingen, Germany.]).

Supporting information


Comment top

It is well known that derivatives of pyrazole, imidazole, triazole, tetrazole and indole exhibit extensive biological activities (De Luca, 2006; Fringuelli et al., 2005; Di Santo et al., 2005; Menozzi et al., 2004). In a search for more efficient antibacterial medicines, we have synthesized a new azole derivative and its crystal structure is reported here.

In the molecule of the title compound (Fig. 1), which possesses a crystallographically imposed twofold axis, the torsion angles C1—S1—S1i—C1i and S1i—S1—C1—N3 are 83.69 (8) and -93.69 (13)°, respectively [symmetry code: (i) -x, y, -0.5 - z]. The dihedral angle formed by the triazole rings is 21.80 (7)°. In the crystal structure (Fig. 2 and 3), molecules are linked by N—H···N hydrogen bonding interactions (Table 1) to form stepped chains running parallel to the c axis.

Related literature top

For related literature, see: De Luca (2006); Di Santo, Tafi, Costi, Botta, Artico, Corelli, Forte, Caporuscio, Angiolella & Palamara (2005); Fringuelli et al. (2005); Menozzi et al. (2004).

Experimental top

3-Mercapto-1H-1,2,4-triazole (0.025 mol, 5.05 g) and sodium hydroxide (0.025 mol, 1.01 g) were dissolved in ethanol (15 ml). The mixture was refluxed at 353 K for five hours, cooled to room temperature, acidified with HCl (12 M) and filtered. Colourless crystal of the title compound were obtained on slow evaporation of the solvent after several days at room temperature.

Refinement top

All H atoms were located in a difference Fourier map and refined isotropically.

Structure description top

It is well known that derivatives of pyrazole, imidazole, triazole, tetrazole and indole exhibit extensive biological activities (De Luca, 2006; Fringuelli et al., 2005; Di Santo et al., 2005; Menozzi et al., 2004). In a search for more efficient antibacterial medicines, we have synthesized a new azole derivative and its crystal structure is reported here.

In the molecule of the title compound (Fig. 1), which possesses a crystallographically imposed twofold axis, the torsion angles C1—S1—S1i—C1i and S1i—S1—C1—N3 are 83.69 (8) and -93.69 (13)°, respectively [symmetry code: (i) -x, y, -0.5 - z]. The dihedral angle formed by the triazole rings is 21.80 (7)°. In the crystal structure (Fig. 2 and 3), molecules are linked by N—H···N hydrogen bonding interactions (Table 1) to form stepped chains running parallel to the c axis.

For related literature, see: De Luca (2006); Di Santo, Tafi, Costi, Botta, Artico, Corelli, Forte, Caporuscio, Angiolella & Palamara (2005); Fringuelli et al. (2005); Menozzi et al. (2004).

Computing details top

Data collection: RAPID-AUTO (Rigaku, 1998); cell refinement: RAPID-AUTO (Rigaku, 1998); data reduction: RAPID-AUTO (Rigaku, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL/PC (Sheldrick, 1993); software used to prepare material for publication: SHELXL97 (Sheldrick,1997).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. [Symmetry code: (i) -x, y, -z - 1/2]
[Figure 2] Fig. 2. The chain of hydrogen-bonded molecules running along the c axis. Hydrogen bonding interactions are shown as red dashed lines.
[Figure 3] Fig. 3. Packing diagram of the title compound viewed along the c axis.
Bis(4H-1,2,4-triazol-3-yl)disulfane top
Crystal data top
C4H4N6S2F(000) = 408
Mr = 200.25Dx = 1.759 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 25 reflections
a = 14.052 (3) Åθ = 12–18°
b = 6.4044 (13) ŵ = 0.65 mm1
c = 9.928 (2) ÅT = 293 K
β = 122.18 (3)°Block, colourless
V = 756.2 (4) Å30.12 × 0.09 × 0.06 mm
Z = 4
Data collection top
Rigaku R-AXIS RAPID IP
diffractometer
859 independent reflections
Radiation source: fine-focus sealed tube742 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
Oscillation scansθmax = 27.5°, θmin = 3.4°
Absorption correction: multi-scan
(ABSCOR; Higashi, 1995)
h = 1818
Tmin = 0.932, Tmax = 0.962k = 87
3518 measured reflectionsl = 1212
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081All H-atom parameters refined
S = 1.09 w = 1/[σ2(Fo2) + (0.0491P)2]
where P = (Fo2 + 2Fc2)/3
859 reflections(Δ/σ)max < 0.001
63 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = 0.22 e Å3
Crystal data top
C4H4N6S2V = 756.2 (4) Å3
Mr = 200.25Z = 4
Monoclinic, C2/cMo Kα radiation
a = 14.052 (3) ŵ = 0.65 mm1
b = 6.4044 (13) ÅT = 293 K
c = 9.928 (2) Å0.12 × 0.09 × 0.06 mm
β = 122.18 (3)°
Data collection top
Rigaku R-AXIS RAPID IP
diffractometer
859 independent reflections
Absorption correction: multi-scan
(ABSCOR; Higashi, 1995)
742 reflections with I > 2σ(I)
Tmin = 0.932, Tmax = 0.962Rint = 0.035
3518 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0290 restraints
wR(F2) = 0.081All H-atom parameters refined
S = 1.09Δρmax = 0.25 e Å3
859 reflectionsΔρmin = 0.22 e Å3
63 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S10.08684 (3)0.07452 (6)0.17828 (4)0.03333 (18)
N10.13246 (12)0.4379 (2)0.15290 (16)0.0330 (3)
N20.11117 (12)0.2436 (2)0.08916 (15)0.0350 (3)
N30.13151 (11)0.4757 (2)0.06502 (15)0.0315 (3)
C10.11097 (11)0.2743 (2)0.04273 (16)0.0275 (3)
C20.14361 (13)0.5723 (3)0.06089 (18)0.0331 (4)
H10.1365 (17)0.462 (4)0.244 (3)0.053 (6)*
H20.1600 (16)0.725 (3)0.083 (2)0.042 (5)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.0383 (3)0.0327 (3)0.0299 (3)0.00536 (14)0.0188 (2)0.00149 (13)
N10.0378 (7)0.0423 (8)0.0238 (7)0.0035 (5)0.0197 (6)0.0008 (5)
N20.0434 (7)0.0387 (8)0.0284 (7)0.0037 (5)0.0228 (6)0.0035 (5)
N30.0383 (7)0.0365 (7)0.0258 (7)0.0025 (5)0.0212 (6)0.0017 (5)
C10.0280 (7)0.0346 (8)0.0215 (7)0.0031 (5)0.0143 (6)0.0022 (5)
C20.0357 (8)0.0387 (9)0.0270 (8)0.0029 (6)0.0181 (7)0.0034 (6)
Geometric parameters (Å, º) top
S1—C11.7541 (15)N2—C11.3225 (19)
S1—S1i2.0693 (11)N3—C21.322 (2)
N1—C21.324 (2)N3—C11.3653 (19)
N1—N21.3549 (18)C2—H21.004 (19)
N1—H10.89 (2)
C1—S1—S1i101.72 (5)N2—C1—N3114.30 (13)
C2—N1—N2110.63 (13)N2—C1—S1123.30 (12)
C2—N1—H1128.6 (15)N3—C1—S1122.40 (11)
N2—N1—H1120.8 (15)N3—C2—N1110.21 (15)
C1—N2—N1102.11 (13)N3—C2—H2124.4 (12)
C2—N3—C1102.74 (13)N1—C2—H2125.4 (12)
Symmetry code: (i) x, y, z1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···N3ii0.89 (2)1.97 (2)2.8617 (19)174.9 (19)
Symmetry code: (ii) x, y+1, z+1/2.

Experimental details

Crystal data
Chemical formulaC4H4N6S2
Mr200.25
Crystal system, space groupMonoclinic, C2/c
Temperature (K)293
a, b, c (Å)14.052 (3), 6.4044 (13), 9.928 (2)
β (°) 122.18 (3)
V3)756.2 (4)
Z4
Radiation typeMo Kα
µ (mm1)0.65
Crystal size (mm)0.12 × 0.09 × 0.06
Data collection
DiffractometerRigaku R-AXIS RAPID IP
Absorption correctionMulti-scan
(ABSCOR; Higashi, 1995)
Tmin, Tmax0.932, 0.962
No. of measured, independent and
observed [I > 2σ(I)] reflections
3518, 859, 742
Rint0.035
(sin θ/λ)max1)0.649
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.029, 0.081, 1.09
No. of reflections859
No. of parameters63
H-atom treatmentAll H-atom parameters refined
Δρmax, Δρmin (e Å3)0.25, 0.22

Computer programs: RAPID-AUTO (Rigaku, 1998), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL/PC (Sheldrick, 1993), SHELXL97 (Sheldrick,1997).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···N3i0.89 (2)1.97 (2)2.8617 (19)174.9 (19)
Symmetry code: (i) x, y+1, z+1/2.
 

Acknowledgements

This work was supported financially by the Natural Science Project of Jinggangshan University (JZ0731).

References

First citationDe Luca, L. (2006). Curr. Med. Chem. 13, 1–23.  CrossRef PubMed CAS Google Scholar
First citationDi Santo, R., Tafi, A., Costi, R., Botta, M., Artico, M., Corelli, F., Forte, M., Caporuscio, F., Angiolella, L. & Palamara, A. T. (2005). J. Med. Chem. 48, 5140–5153.  Web of Science CrossRef PubMed CAS Google Scholar
First citationFringuelli, R., Milanese, L. & Schiaffella, F. (2005). Mini-Rev. Med. Chem. 5, 1061–1073.  Web of Science CrossRef CAS Google Scholar
First citationHigashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan.  Google Scholar
First citationMenozzi, G., Merello, L., Fossa, P., Schenone, S., Ranise, A., Mosti, L., Bondavalli, F., Loddo, R., Murgioni, C., Mascia, V., La Colla, P. & Tamburini, E. (2004). Bioorg. Med. Chem. 12, 5465–5483.  Web of Science CrossRef PubMed CAS Google Scholar
First citationRigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan.  Google Scholar
First citationSheldrick, G. M. (1993). SHELXTL/PC. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA.  Google Scholar
First citationSheldrick, G. M. (1997). SHELXL97 and SHELXS97. University of Göttingen, Germany.  Google Scholar

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Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
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