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The crystal structure of the title compound, C22H30N53+·3ClO4, at 180 K contains intramolecular N—H...N and intermolec­ular N—H...O hydrogen bonds.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536804025103/bt6537sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536804025103/bt6537Isup2.hkl
Contains datablock I

CCDC reference: 255888

Key indicators

  • Single-crystal X-ray study
  • T = 180 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.056
  • wR factor = 0.154
  • Data-to-parameter ratio = 14.9

checkCIF/PLATON results

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Alert level C PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT244_ALERT_4_C Low Solvent U(eq) as Compared to Neighbors for Cl1 PLAT244_ALERT_4_C Low Solvent U(eq) as Compared to Neighbors for Cl2 PLAT244_ALERT_4_C Low Solvent U(eq) as Compared to Neighbors for Cl3
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: APEX2 (Bruker-Nonius, 2004); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2000); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

N-Methyl-N-(2-pyridiniomethyl)-2-[N-(3-pyridiniomethyl)methylamino]- N-(2-pyridylmethyl)ethanaminium triperchlorate top
Crystal data top
C22H30N53+·3ClO4F(000) = 1376
Mr = 662.86Dx = 1.586 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8693 reflections
a = 13.6004 (3) Åθ = 2.8–26.4°
b = 8.7668 (2) ŵ = 0.40 mm1
c = 23.5440 (5) ÅT = 180 K
β = 98.493 (1)°Block, colourless
V = 2776.41 (11) Å30.25 × 0.20 × 0.20 mm
Z = 4
Data collection top
Bruker–Nonius X8APEX-II CCD
diffractometer
5653 independent reflections
Radiation source: fine-focus sealed tube4549 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
thin–slice ω and φ scansθmax = 26.4°, θmin = 3.7°
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
h = 1616
Tmin = 0.841, Tmax = 0.924k = 1010
55950 measured reflectionsl = 2929
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154H-atom parameters constrained
S = 1.06 w = 1/[σ2(Fo2) + (0.0667P)2 + 5.5837P]
where P = (Fo2 + 2Fc2)/3
5653 reflections(Δ/σ)max < 0.001
379 parametersΔρmax = 1.25 e Å3
0 restraintsΔρmin = 1.10 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.1568 (2)0.5060 (4)0.40930 (12)0.0405 (7)
H1B0.20340.43780.39870.049*
N20.09675 (18)0.5762 (3)0.26788 (10)0.0277 (5)
N30.08714 (17)0.4901 (3)0.19285 (10)0.0223 (5)
N40.10675 (18)0.3549 (3)0.06489 (10)0.0258 (5)
H4B0.16910.37300.07920.031*
N50.27891 (19)0.4493 (3)0.12877 (11)0.0285 (5)
C10.1483 (3)0.5618 (5)0.46301 (15)0.0480 (9)
H1A0.19190.52750.48840.058*
C20.0775 (3)0.6667 (4)0.48084 (14)0.0404 (8)
H2A0.07030.70670.51870.048*
C30.0163 (3)0.7141 (4)0.44285 (16)0.0470 (9)
H3A0.03370.78820.45440.056*
C40.0268 (3)0.6548 (4)0.38802 (14)0.0388 (8)
H4A0.01580.68800.36200.047*
C50.0986 (2)0.5484 (3)0.37116 (12)0.0262 (6)
C60.1155 (2)0.4717 (4)0.31340 (13)0.0308 (7)
H6A0.07090.38230.31390.037*
H6B0.18500.43470.30540.037*
C70.1749 (3)0.6936 (4)0.25923 (15)0.0434 (9)
H7A0.17650.74870.29530.065*
H7B0.23940.64490.24710.065*
H7C0.16070.76530.22960.065*
C80.0948 (2)0.4941 (4)0.21349 (12)0.0287 (6)
H8A0.10300.56890.18160.034*
H8B0.15210.42340.20720.034*
C90.0001 (2)0.4037 (3)0.21137 (12)0.0255 (6)
H9A0.01610.31680.18480.031*
H9B0.02210.36060.25000.031*
C100.1129 (2)0.6250 (3)0.23135 (12)0.0256 (6)
H10A0.16890.68000.21910.038*
H10B0.13130.59000.27100.038*
H10C0.05530.69310.22900.038*
C110.0640 (2)0.5506 (3)0.13169 (12)0.0236 (6)
H11A0.00950.62610.13020.028*
H11B0.12340.60500.12230.028*
C120.0344 (2)0.4319 (3)0.08627 (12)0.0244 (6)
C130.0630 (2)0.4057 (4)0.06372 (13)0.0306 (6)
H13A0.11480.45930.07810.037*
C140.0853 (2)0.3004 (4)0.01979 (13)0.0340 (7)
H14A0.15260.28160.00390.041*
C150.0098 (2)0.2228 (4)0.00087 (13)0.0327 (7)
H15A0.02440.15020.03090.039*
C160.0871 (2)0.2521 (3)0.02264 (13)0.0307 (7)
H16A0.13990.19950.00890.037*
C170.1744 (2)0.3779 (3)0.19977 (12)0.0250 (6)
H17A0.18610.34190.24010.030*
H17B0.15560.28820.17500.030*
C180.2704 (2)0.4420 (3)0.18502 (12)0.0255 (6)
C190.3476 (2)0.4836 (3)0.22752 (13)0.0273 (6)
H19A0.33960.47960.26690.033*
C200.4369 (2)0.5311 (4)0.21128 (14)0.0332 (7)
H20A0.49180.55620.23960.040*
C210.4449 (2)0.5414 (4)0.15400 (15)0.0361 (7)
H21A0.50480.57570.14200.043*
C220.3638 (2)0.5008 (4)0.11388 (14)0.0333 (7)
H22A0.36900.51010.07420.040*
Cl10.27605 (5)0.93272 (9)0.11899 (3)0.02912 (19)
O10.2646 (2)1.0886 (3)0.13408 (15)0.0639 (8)
O20.2358 (3)0.8386 (4)0.15794 (14)0.0790 (11)
O30.2237 (3)0.9072 (5)0.06382 (13)0.1008 (14)
O40.3778 (2)0.9008 (4)0.1204 (2)0.0920 (13)
Cl20.92833 (5)1.00293 (8)0.13467 (3)0.02686 (18)
O50.87627 (19)0.9867 (3)0.07743 (10)0.0437 (6)
O61.01730 (17)1.0894 (3)0.13370 (11)0.0426 (6)
O70.86590 (18)1.0787 (3)0.16942 (11)0.0500 (7)
O80.9552 (2)0.8565 (3)0.15862 (12)0.0556 (7)
Cl30.68573 (6)0.59405 (11)0.07137 (4)0.0438 (2)
O90.7506 (4)0.7019 (4)0.1032 (2)0.138 (2)
O100.7030 (3)0.4562 (5)0.1014 (2)0.1117 (17)
O110.5874 (3)0.6371 (8)0.0625 (2)0.157 (3)
O120.7180 (3)0.5883 (9)0.01942 (17)0.146 (3)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0336 (15)0.0618 (19)0.0269 (14)0.0169 (13)0.0067 (11)0.0003 (13)
N20.0308 (13)0.0303 (13)0.0233 (12)0.0064 (10)0.0082 (10)0.0025 (10)
N30.0286 (12)0.0185 (11)0.0201 (11)0.0008 (9)0.0046 (9)0.0001 (9)
N40.0291 (12)0.0262 (12)0.0219 (12)0.0014 (10)0.0036 (9)0.0003 (10)
N50.0327 (13)0.0267 (13)0.0269 (13)0.0054 (10)0.0073 (10)0.0010 (10)
C10.0414 (19)0.078 (3)0.0264 (17)0.0109 (19)0.0104 (14)0.0017 (18)
C20.048 (2)0.048 (2)0.0260 (16)0.0022 (16)0.0076 (14)0.0035 (14)
C30.064 (2)0.040 (2)0.0384 (19)0.0179 (18)0.0127 (17)0.0080 (16)
C40.051 (2)0.0356 (17)0.0342 (17)0.0110 (15)0.0189 (15)0.0041 (14)
C50.0249 (14)0.0282 (15)0.0261 (15)0.0050 (11)0.0060 (11)0.0034 (12)
C60.0337 (16)0.0309 (16)0.0288 (16)0.0026 (13)0.0077 (13)0.0011 (12)
C70.0458 (19)0.051 (2)0.0360 (18)0.0212 (17)0.0153 (15)0.0098 (16)
C80.0263 (14)0.0357 (16)0.0239 (15)0.0011 (12)0.0034 (11)0.0002 (12)
C90.0304 (15)0.0234 (14)0.0230 (14)0.0015 (11)0.0054 (11)0.0004 (11)
C100.0332 (15)0.0199 (13)0.0237 (14)0.0006 (11)0.0047 (12)0.0029 (11)
C110.0300 (14)0.0204 (13)0.0209 (14)0.0034 (11)0.0049 (11)0.0016 (11)
C120.0301 (14)0.0225 (14)0.0210 (13)0.0041 (11)0.0047 (11)0.0012 (11)
C130.0316 (15)0.0331 (16)0.0266 (15)0.0048 (13)0.0033 (12)0.0002 (12)
C140.0359 (17)0.0357 (17)0.0284 (16)0.0022 (13)0.0024 (13)0.0033 (13)
C150.0476 (19)0.0276 (15)0.0221 (14)0.0040 (14)0.0031 (13)0.0025 (12)
C160.0418 (17)0.0273 (15)0.0241 (15)0.0031 (13)0.0083 (13)0.0014 (12)
C170.0289 (14)0.0209 (13)0.0254 (14)0.0038 (11)0.0049 (11)0.0042 (11)
C180.0305 (15)0.0196 (13)0.0271 (15)0.0043 (11)0.0067 (12)0.0028 (11)
C190.0308 (15)0.0227 (14)0.0278 (15)0.0031 (11)0.0029 (12)0.0018 (12)
C200.0311 (16)0.0294 (16)0.0383 (18)0.0008 (12)0.0027 (13)0.0009 (13)
C210.0319 (16)0.0349 (17)0.0443 (19)0.0000 (13)0.0145 (14)0.0014 (15)
C220.0374 (17)0.0354 (17)0.0300 (16)0.0046 (13)0.0145 (13)0.0020 (13)
Cl10.0329 (4)0.0335 (4)0.0213 (3)0.0079 (3)0.0053 (3)0.0043 (3)
O10.0657 (19)0.0350 (15)0.085 (2)0.0060 (13)0.0083 (16)0.0076 (14)
O20.120 (3)0.064 (2)0.065 (2)0.012 (2)0.054 (2)0.0141 (17)
O30.120 (3)0.145 (4)0.0338 (17)0.041 (3)0.0007 (18)0.029 (2)
O40.0403 (17)0.060 (2)0.178 (4)0.0012 (15)0.023 (2)0.007 (2)
Cl20.0311 (4)0.0238 (3)0.0261 (4)0.0055 (3)0.0057 (3)0.0010 (3)
O50.0488 (14)0.0523 (15)0.0284 (12)0.0000 (12)0.0000 (10)0.0043 (11)
O60.0351 (12)0.0473 (15)0.0454 (14)0.0048 (11)0.0064 (10)0.0044 (11)
O70.0390 (13)0.0662 (18)0.0471 (15)0.0113 (12)0.0144 (11)0.0155 (13)
O80.0717 (19)0.0303 (13)0.0613 (17)0.0094 (13)0.0013 (14)0.0138 (12)
Cl30.0344 (4)0.0558 (5)0.0418 (5)0.0060 (4)0.0081 (3)0.0042 (4)
O90.211 (5)0.056 (2)0.113 (3)0.028 (3)0.084 (4)0.020 (2)
O100.079 (3)0.075 (2)0.164 (4)0.023 (2)0.041 (3)0.061 (3)
O110.049 (2)0.287 (7)0.146 (4)0.074 (3)0.050 (2)0.156 (5)
O120.076 (3)0.312 (8)0.052 (2)0.033 (4)0.0221 (19)0.000 (3)
Geometric parameters (Å, º) top
N1—C51.335 (4)C10—H10C0.980
N1—C11.345 (4)C11—C121.504 (4)
N1—H1B0.880C11—H11A0.990
N2—C61.461 (4)C11—H11B0.990
N2—C71.472 (4)C12—C131.372 (4)
N2—C81.472 (4)C13—C141.386 (4)
N3—C101.500 (3)C13—H13A0.950
N3—C91.522 (4)C14—C151.380 (5)
N3—C111.523 (3)C14—H14A0.9500
N3—C171.532 (3)C15—C161.375 (4)
N4—C161.340 (4)C15—H15A0.950
N4—C121.350 (4)C16—H16A0.950
N4—H4B0.880C17—C181.507 (4)
N5—C221.334 (4)C17—H17A0.990
N5—C181.348 (4)C17—H17B0.990
C1—C21.353 (5)C18—C191.388 (4)
C1—H1A0.950C19—C201.390 (4)
C2—C31.373 (5)C19—H19A0.950
C2—H2A0.950C20—C211.372 (5)
C3—C41.379 (5)C20—H20A0.950
C3—H3A0.950C21—C221.388 (5)
C4—C51.366 (4)C21—H21A0.950
C4—H4A0.950C22—H22A0.950
C5—C61.504 (4)Cl1—O31.404 (3)
C6—H6A0.990Cl1—O21.404 (3)
C6—H6B0.990Cl1—O41.407 (3)
C7—H7A0.980Cl1—O11.427 (3)
C7—H7B0.980Cl2—O71.427 (2)
C7—H7C0.980Cl2—O81.428 (3)
C8—C91.522 (4)Cl2—O61.431 (2)
C8—H8A0.990Cl2—O51.434 (2)
C8—H8B0.990Cl3—O121.360 (4)
C9—H9A0.990Cl3—O111.375 (3)
C9—H9B0.990Cl3—O101.403 (4)
C10—H10A0.980Cl3—O91.428 (4)
C10—H10B0.980
C5—N1—C1123.7 (3)C12—C11—N3115.3 (2)
C5—N1—H1B118.2C12—C11—H11A108.5
C1—N1—H1B118.2N3—C11—H11A108.5
C6—N2—C7109.8 (2)C12—C11—H11B108.5
C6—N2—C8111.1 (2)N3—C11—H11B108.5
C7—N2—C8109.1 (2)H11A—C11—H11B107.5
C10—N3—C9110.0 (2)N4—C12—C13119.2 (3)
C10—N3—C11107.1 (2)N4—C12—C11118.5 (3)
C9—N3—C11112.5 (2)C13—C12—C11122.2 (3)
C10—N3—C17109.5 (2)C12—C13—C14119.5 (3)
C9—N3—C17105.9 (2)C12—C13—H13A120.2
C11—N3—C17111.9 (2)C14—C13—H13A120.2
C16—N4—C12122.4 (3)C15—C14—C13119.9 (3)
C16—N4—H4B118.8C15—C14—H14A120.0
C12—N4—H4B118.8C13—C14—H14A120.0
C22—N5—C18118.5 (3)C16—C15—C14119.0 (3)
N1—C1—C2119.8 (3)C16—C15—H15A120.5
N1—C1—H1A120.1C14—C15—H15A120.5
C2—C1—H1A120.1N4—C16—C15119.9 (3)
C1—C2—C3118.4 (3)N4—C16—H16A120.0
C1—C2—H2A120.8C15—C16—H16A120.0
C3—C2—H2A120.8C18—C17—N3114.8 (2)
C2—C3—C4120.4 (3)C18—C17—H17A108.6
C2—C3—H3A119.8N3—C17—H17A108.6
C4—C3—H3A119.8C18—C17—H17B108.6
C5—C4—C3120.0 (3)N3—C17—H17B108.6
C5—C4—H4A120.0H17A—C17—H17B107.5
C3—C4—H4A120.0N5—C18—C19122.0 (3)
N1—C5—C4117.7 (3)N5—C18—C17116.6 (3)
N1—C5—C6117.2 (3)C19—C18—C17121.4 (3)
C4—C5—C6125.1 (3)C18—C19—C20118.6 (3)
N2—C6—C5111.3 (2)C18—C19—H19A120.7
N2—C6—H6A109.4C20—C19—H19A120.7
C5—C6—H6A109.4C21—C20—C19119.3 (3)
N2—C6—H6B109.4C21—C20—H20A120.3
C5—C6—H6B109.4C19—C20—H20A120.3
H6A—C6—H6B108.0C20—C21—C22118.8 (3)
N2—C7—H7A109.5C20—C21—H21A120.6
N2—C7—H7B109.5C22—C21—H21A120.6
H7A—C7—H7B109.5N5—C22—C21122.6 (3)
N2—C7—H7C109.5N5—C22—H22A118.7
H7A—C7—H7C109.5C21—C22—H22A118.7
H7B—C7—H7C109.5O3—Cl1—O2108.5 (2)
N2—C8—C9114.0 (2)O3—Cl1—O4110.6 (3)
N2—C8—H8A108.7O2—Cl1—O4110.2 (2)
C9—C8—H8A108.7O3—Cl1—O1108.9 (2)
N2—C8—H8B108.7O2—Cl1—O1109.5 (2)
C9—C8—H8B108.7O4—Cl1—O1109.2 (2)
H8A—C8—H8B107.6O7—Cl2—O8109.36 (18)
C8—C9—N3116.7 (2)O7—Cl2—O6109.78 (16)
C8—C9—H9A108.1O8—Cl2—O6108.38 (16)
N3—C9—H9A108.1O7—Cl2—O5109.38 (15)
C8—C9—H9B108.1O8—Cl2—O5110.12 (16)
N3—C9—H9B108.1O6—Cl2—O5109.80 (15)
H9A—C9—H9B107.3O12—Cl3—O11108.0 (3)
N3—C10—H10A109.5O12—Cl3—O10111.6 (4)
N3—C10—H10B109.5O11—Cl3—O10113.6 (3)
H10A—C10—H10B109.5O12—Cl3—O9103.9 (4)
N3—C10—H10C109.5O11—Cl3—O9114.1 (4)
H10A—C10—H10C109.5O10—Cl3—O9105.1 (2)
H10B—C10—H10C109.5
C5—N1—C1—C20.1 (6)C16—N4—C12—C11177.1 (3)
N1—C1—C2—C30.4 (6)N3—C11—C12—N483.8 (3)
C1—C2—C3—C40.4 (6)N3—C11—C12—C13100.0 (3)
C2—C3—C4—C50.1 (6)N4—C12—C13—C140.4 (4)
C1—N1—C5—C40.3 (5)C11—C12—C13—C14176.6 (3)
C1—N1—C5—C6178.1 (3)C12—C13—C14—C150.0 (5)
C3—C4—C5—N10.2 (5)C13—C14—C15—C160.2 (5)
C3—C4—C5—C6178.0 (3)C12—N4—C16—C150.6 (4)
C7—N2—C6—C570.0 (3)C14—C15—C16—N40.1 (5)
C8—N2—C6—C5169.3 (2)C10—N3—C17—C1860.0 (3)
N1—C5—C6—N2146.1 (3)C9—N3—C17—C18178.5 (2)
C4—C5—C6—N235.7 (4)C11—N3—C17—C1858.6 (3)
C6—N2—C8—C975.8 (3)C22—N5—C18—C191.3 (4)
C7—N2—C8—C9163.0 (3)C22—N5—C18—C17177.9 (3)
N2—C8—C9—N385.6 (3)N3—C17—C18—N579.7 (3)
C10—N3—C9—C856.7 (3)N3—C17—C18—C19103.6 (3)
C11—N3—C9—C862.5 (3)N5—C18—C19—C201.3 (4)
C17—N3—C9—C8174.9 (2)C17—C18—C19—C20175.2 (3)
C10—N3—C11—C12179.0 (2)C18—C19—C20—C212.6 (4)
C9—N3—C11—C1258.0 (3)C19—C20—C21—C221.3 (5)
C17—N3—C11—C1261.0 (3)C18—N5—C22—C212.6 (5)
C16—N4—C12—C130.7 (4)C20—C21—C22—N51.3 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1B···O5i0.882.533.051 (4)118
N1—H1B···O9i0.882.162.951 (5)149
N4—H4B···N50.881.882.718 (4)159
Symmetry code: (i) x+1/2, y1/2, z+1/2.
 

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