Download citation
Download citation
link to html
The title compound, (+)-(3S,4R)-cis-4-amino-5-chloro-2-meth­oxy-N-(3-methoxy­piperidin-1-ium-4-yl)­benz­amidehydrogen (2R,3R)-di­hydroxy­butane­dioate monohydrate, C14H21ClN3O3+·C4H5O6·H2O, is the (+)-tartrate salt of (+)-norcisapride. It has been found that (+)-norcisapride has both 5-HT3 antagonistic and 5-HT4 agonistic properties and is further substantially devoid of central nervous system effects. An intramolecular N—H...O hydrogen bond forces the amido group to be roughly coplanar with the substituted benzene ring. A three-dimensional network of hydrogen bonds is formed in the crystal. The absolute configuration of (+)-norcisapride is 3S,4R.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536802017683/cm6017sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536802017683/cm6017Isup2.hkl
Contains datablock I

CCDC reference: 198982

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.037
  • wR factor = 0.107
  • Data-to-parameter ratio = 8.0

checkCIF results

No syntax errors found

ADDSYM reports no extra symmetry


Yellow Alert Alert Level C:
ABSTM_02 Alert C The ratio of expected to reported Tmax/Tmin(RR') is < 0.90 Tmin and Tmax reported: 0.325 0.593 Tmin' and Tmax expected: 0.373 0.593 RR' = 0.872 Please check that your absorption correction is appropriate. General Notes
REFLT_03 From the CIF: _diffrn_reflns_theta_max 69.02 From the CIF: _reflns_number_total 2350 Count of symmetry unique reflns 2234 Completeness (_total/calc) 105.19% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 116 Fraction of Friedel pairs measured 0.052 Are heavy atom types Z>Si present yes WARNING: Large fraction of Friedel related reflns may be needed to determine absolute structure
0 Alert Level A = Potentially serious problem
0 Alert Level B = Potential problem
1 Alert Level C = Please check

Comment top

The title compound, (I), is the (+)-tartrate salt of the (+)-enantiomer of norcisapride.

Racemic norcisapride is the principal metabolite of racemic cisapride, a widely used gastrokinetic drug (Meuldermans et al., 1988). The metabolization occurs mainly via the cytochrome P-450 isoenzyme CYP3A4 (Bohets et al., 2000). Certain therapeutic agents (e.g. ketoconazole) that inhibit the metabolic pathway of cisapride can give rise to undesirably high cisapride blood levels that may cause side effects.

It has been discovered that (-)-norcisapride is a potent drug for the treatment of gastro-esophageal reflux disease while substantially reducing adverse effects associated with the administration of racemic cisapride (McCullough & Aberg, 1998). It has also been found that (+)-norcisapride has both 5-HT3 antagonistic and 5-HT4 agonistic properties and is further substantially devoid of central nervous system effects (Heykants et al., 1999).

To contribute to a better understanding of the mechanism of action of the (-)- and (+)-norcisapride, the crystal structure and absolute configuration of the title compound was determined.

The absolute configuration of the (+)-norcisapride moiety is 3S,4R in view of the fact that the Flack (1983) parameter for this configuration is −0.01 (2) and that the known configuration 2R,3R for (+)-tartrate is obtained. As in the structures of cisapride (Collin et al., 1989) and cisapride tartrate (Peeters et al., 1997) an intramolecular hydrogen bond between the amidic N atom and the O atom of the o-methoxy substituent (Table 1) forces the amido moiety and the substituted benzene ring to be roughly coplanar [dihedral angle between the two least-squares planes: 10.8 (1)°]. The C atom chain of the hydrogen tartrate ion is in an extended conformation with the hydroxyl O atoms -sc with respect to one another. The hydrogen bonds listed in Table 2 form a three-dimensional network in the crystal.

Experimental top

The title compound was obtained from the Janssen Rechearch Foundation, Beerse, Belgium. The synthesis has been described by Heykants et al. (1999). Single crystals were grown by slow evaporation from a solution in methanol–water.

Refinement top

The positions of the H atoms of the water molecule were obtained with the program HYDROGEN (Nardelli, 1999). Those of the OH and methyl groups were found from a circular difference Fourier synthesis. The remaining H atoms were calculated geometrically. All H atoms were included in the refinement, but constrained to ride on their parent atoms. The isotropic displacement parameters of the H atoms were fixed at 1.25Ueq of their parent atoms.

Computing details top

Data collection: XSCANS (Siemens, 1996); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: DIAMOND (Bergerhoff, 1996); software used to prepare material for publication: PARST (Nardelli, 1983), PLATON (Spek, 1998) and WinGX (Farrugia, 1999).

Figures top
[Figure 1] Fig. 1. Perspective view of the title compound with the atomic numbering scheme. Displacement ellipsoids are drawn at the 50% probability level.
(+)-(3S,4R)-cis-4-amino-5-chloro-2-methoxy-N-(3-methoxypiperidin-1-ium-4-yl) benzamide hydrogen (2R,3R)-dihydroxybutanedioate monohydrate top
Crystal data top
C14H21ClN3O3+·C4H5O6·H2OF(000) = 508
Mr = 481.89Dx = 1.407 Mg m3
Monoclinic, P21Cu Kα radiation, λ = 1.54178 Å
a = 7.6086 (4) ÅCell parameters from 39 reflections
b = 10.664 (1) Åθ = 10.8–28.0°
c = 14.0482 (6) ŵ = 2.01 mm1
β = 93.980 (6)°T = 293 K
V = 1137.1 (1) Å3Block, colourless
Z = 20.45 × 0.30 × 0.26 mm
Data collection top
Siemens P4 four-circle
diffractometer
Rint = 0.033
ω/2θ scansθmax = 69.0°
Absorption correction: ψ scan
(XEMP; Siemens, 1989)
h = 18
Tmin = 0.325, Tmax = 0.593k = 112
2935 measured reflectionsl = 1717
2350 independent reflections3 standard reflections every 100 reflections
2280 reflections with F2 > 2σ(F2) intensity decay: none
Refinement top
Refinement on F2 w = 1/[σ2(Fo2) + (0.069P)2 + 0.2043P]
where P = (Fo2 + 2Fc2)/3
Least-squares matrix: full(Δ/σ)max < 0.001
R[F2 > 2σ(F2)] = 0.037Δρmax = 0.21 e Å3
wR(F2) = 0.107Δρmin = 0.26 e Å3
S = 1.06Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin((2θ)]-1/4
2350 reflectionsExtinction coefficient: 0.026 (2)
295 parametersAbsolute structure: Flack (1983), 220 Friedel pairs
H-atom parameters constrainedAbsolute structure parameter: 0.01 (2)
Crystal data top
C14H21ClN3O3+·C4H5O6·H2OV = 1137.1 (1) Å3
Mr = 481.89Z = 2
Monoclinic, P21Cu Kα radiation
a = 7.6086 (4) ŵ = 2.01 mm1
b = 10.664 (1) ÅT = 293 K
c = 14.0482 (6) Å0.45 × 0.30 × 0.26 mm
β = 93.980 (6)°
Data collection top
Siemens P4 four-circle
diffractometer
2280 reflections with F2 > 2σ(F2)
Absorption correction: ψ scan
(XEMP; Siemens, 1989)
Rint = 0.033
Tmin = 0.325, Tmax = 0.5933 standard reflections every 100 reflections
2935 measured reflections intensity decay: none
2350 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.037H-atom parameters constrained
wR(F2) = 0.107Δρmax = 0.21 e Å3
S = 1.06Δρmin = 0.26 e Å3
2350 reflectionsAbsolute structure: Flack (1983), 220 Friedel pairs
295 parametersAbsolute structure parameter: 0.01 (2)
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N11.0233 (3)0.8441 (3)0.5720 (2)0.0472 (8)*
C20.9115 (5)0.9582 (4)0.5754 (2)0.052 (1)*
C30.8016 (4)0.9525 (3)0.6611 (2)0.0445 (8)*
C40.6873 (4)0.8348 (3)0.6578 (2)0.0443 (8)*
C50.7988 (4)0.7178 (3)0.6499 (2)0.0472 (9)*
C60.9171 (4)0.7267 (4)0.5667 (2)0.051 (1)*
O70.9111 (3)0.9443 (2)0.7472 (1)0.0496 (6)*
C80.9896 (8)1.0584 (5)0.7775 (4)0.094 (2)*
N90.5907 (3)0.8322 (3)0.7439 (2)0.0509 (9)*
C100.4270 (4)0.7920 (3)0.7488 (2)0.043 (1)*
O110.3413 (3)0.7443 (2)0.6784 (1)0.0489 (6)*
C120.3447 (3)0.8048 (3)0.8414 (2)0.0416 (9)*
C130.4104 (4)0.8751 (3)0.9209 (2)0.0468 (9)*
C140.3177 (4)0.8832 (4)1.0018 (2)0.0506 (9)*
C150.1554 (4)0.8235 (3)1.0080 (2)0.0494 (9)*
C160.0901 (4)0.7531 (3)0.9287 (2)0.0469 (9)*
C170.1846 (4)0.7434 (3)0.8483 (2)0.0430 (8)*
O180.5680 (3)0.9344 (3)0.9141 (2)0.0615 (8)*
C190.6417 (6)1.0067 (6)0.9924 (3)0.083 (2)*
N200.0663 (5)0.8328 (4)1.0882 (2)0.071 (1)*
Cl210.1091 (1)0.6751 (1)0.93367 (7)0.0695 (3)*
O220.7777 (4)0.3019 (4)0.5790 (2)0.076 (1)*
O230.8168 (3)0.4087 (3)0.7152 (2)0.0561 (8)*
C240.7273 (4)0.3465 (4)0.6541 (2)0.0474 (9)*
C250.5358 (4)0.3187 (3)0.6734 (2)0.0467 (9)*
O260.4549 (3)0.2500 (3)0.5963 (2)0.0650 (9)*
C270.4360 (4)0.4391 (3)0.6895 (2)0.0434 (9)*
O280.4358 (3)0.5134 (2)0.6063 (2)0.0475 (7)*
C290.2509 (4)0.4065 (3)0.7192 (2)0.047 (1)*
O300.1244 (3)0.4570 (3)0.6666 (2)0.0628 (8)*
O310.2339 (3)0.3397 (4)0.7876 (2)0.081 (1)*
O320.3290 (5)0.0093 (4)0.5658 (3)0.109 (2)*
H1A1.09820.84170.62440.059*
H1B1.08770.84850.52070.059*
H2A0.83490.96390.51740.065*
H2B0.98571.03220.57950.065*
H30.72681.02720.66250.056*
H40.60270.83950.60200.055*
H5A0.72240.64540.64110.059*
H5B0.87140.70620.70880.059*
H6A0.99540.65490.56780.064*
H6B0.84490.72490.50700.064*
H8A1.06361.04460.83470.117*
H8B0.89941.11790.79010.117*
H8C1.05921.09040.72860.117*
H90.64460.85890.79580.064*
H140.36450.92971.05360.063*
H170.13980.69450.79740.054*
H19A0.75531.03750.97790.104*
H19B0.65400.95511.04850.104*
H19C0.56551.07611.00360.104*
H20A0.10970.87591.13590.089*
H20B0.03340.79571.09120.089*
H250.53480.26720.73120.058*
H260.52760.23550.55720.081*
H270.49830.48510.74200.054*
H280.40800.58550.61880.059*
H300.02990.43930.68800.078*
H32A0.35520.08100.58910.137*
H32B0.35340.00970.50770.137*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.035 (1)0.068 (2)0.040 (1)0.003 (1)0.0108 (9)0.001 (1)
C20.052 (2)0.061 (2)0.045 (2)0.001 (2)0.009 (1)0.009 (1)
C30.040 (2)0.053 (2)0.041 (1)0.004 (1)0.007 (1)0.001 (1)
C40.031 (1)0.068 (2)0.035 (1)0.002 (1)0.0071 (9)0.005 (1)
C50.044 (2)0.054 (2)0.045 (1)0.007 (1)0.009 (1)0.005 (1)
C60.044 (2)0.062 (2)0.049 (2)0.002 (1)0.014 (1)0.011 (1)
O70.049 (1)0.056 (1)0.043 (1)0.005 (1)0.0005 (8)0.005 (1)
C80.123 (4)0.068 (3)0.087 (3)0.026 (3)0.023 (3)0.016 (2)
N90.029 (1)0.090 (2)0.035 (1)0.006 (1)0.0060 (8)0.010 (1)
C100.037 (2)0.055 (2)0.038 (1)0.003 (1)0.005 (1)0.004 (1)
O110.041 (1)0.064 (1)0.041 (1)0.003 (1)0.0038 (7)0.010 (1)
C120.030 (1)0.055 (2)0.040 (1)0.002 (1)0.007 (1)0.003 (1)
C130.043 (2)0.056 (2)0.042 (1)0.002 (1)0.007 (1)0.008 (1)
C140.048 (2)0.063 (2)0.042 (1)0.001 (2)0.008 (1)0.008 (1)
C150.051 (2)0.058 (2)0.041 (1)0.008 (1)0.017 (1)0.005 (1)
C160.035 (2)0.059 (2)0.047 (1)0.003 (1)0.011 (1)0.008 (1)
C170.035 (2)0.053 (2)0.041 (1)0.002 (1)0.003 (1)0.001 (1)
O180.048 (1)0.087 (2)0.050 (1)0.022 (1)0.0130 (9)0.024 (1)
C190.074 (3)0.110 (4)0.066 (2)0.031 (3)0.008 (2)0.035 (3)
N200.072 (2)0.093 (2)0.052 (1)0.006 (2)0.032 (1)0.002 (2)
Cl210.0483 (5)0.0927 (7)0.0693 (5)0.0162 (4)0.0172 (3)0.0086 (5)
O220.057 (2)0.111 (2)0.064 (1)0.009 (2)0.032 (1)0.015 (2)
O230.029 (1)0.083 (2)0.056 (1)0.003 (1)0.0063 (8)0.001 (1)
C240.030 (1)0.065 (2)0.047 (1)0.003 (1)0.011 (1)0.006 (1)
C250.035 (2)0.056 (2)0.049 (2)0.004 (1)0.008 (1)0.001 (1)
O260.048 (1)0.069 (2)0.078 (2)0.007 (1)0.004 (1)0.020 (1)
C270.031 (2)0.061 (2)0.039 (1)0.006 (1)0.009 (1)0.005 (1)
O280.037 (1)0.054 (1)0.053 (1)0.0037 (9)0.0135 (8)0.001 (1)
C290.028 (1)0.072 (2)0.043 (1)0.001 (1)0.009 (1)0.001 (1)
O300.026 (1)0.098 (2)0.065 (1)0.002 (1)0.0074 (9)0.021 (1)
O310.042 (1)0.136 (3)0.067 (1)0.005 (2)0.019 (1)0.039 (2)
O320.105 (3)0.072 (2)0.149 (3)0.017 (2)0.000 (2)0.003 (3)
Geometric parameters (Å, º) top
N1—H1A0.900C14—H140.930
N1—H1B0.900C14—C151.398 (5)
N1—C21.487 (5)C15—C161.404 (4)
N1—C61.489 (5)C15—N201.358 (5)
C2—H2A0.970C16—C171.384 (4)
C2—H2B0.970C16—Cl211.735 (3)
C2—C31.513 (4)C17—H170.930
C3—H30.980O18—C191.427 (5)
C3—C41.526 (5)C19—H19A0.960
C3—O71.423 (3)C19—H19B0.960
C4—H40.980C19—H19C0.960
C4—C51.517 (5)N20—H20A0.860
C4—N91.459 (4)N20—H20B0.860
C5—H5A0.970O22—C241.242 (4)
C5—H5B0.970O23—C241.249 (4)
C5—C61.527 (5)C24—C251.529 (4)
C6—H6A0.970C25—H250.980
C6—H6B0.970C25—O261.413 (4)
O7—C81.408 (6)C25—C271.517 (5)
C8—H8A0.960O26—H260.820
C8—H8B0.960C27—H270.980
C8—H8C0.960C27—O281.412 (4)
N9—H90.860C27—C291.536 (4)
N9—C101.323 (4)O28—H280.820
C10—O111.254 (3)C29—O301.290 (4)
C10—C121.488 (4)C29—O311.210 (5)
C12—C131.408 (4)O30—H300.820
C12—C171.392 (4)O32—H32A0.850
C13—C141.382 (4)O32—H32B0.850
C13—O181.364 (4)
H1A—N1—H1B107.9C10—C12—C17116.2 (2)
H1A—N1—C2109.1C13—C12—C17117.3 (3)
H1A—N1—C6109.1C12—C13—C14120.9 (3)
H1B—N1—C2109.1C12—C13—O18117.2 (3)
H1B—N1—C6109.1C14—C13—O18122.0 (3)
C2—N1—C6112.3 (3)C13—C14—H14119.1
N1—C2—H2A109.7C13—C14—C15121.7 (3)
N1—C2—H2B109.7H14—C14—C15119.1
N1—C2—C3110.0 (3)C14—C15—C16117.4 (3)
H2A—C2—H2B108.2C14—C15—N20120.8 (3)
H2A—C2—C3109.7C16—C15—N20121.9 (3)
H2B—C2—C3109.7C15—C16—C17120.8 (3)
C2—C3—H3109.8C15—C16—Cl21119.1 (2)
C2—C3—C4110.8 (3)C17—C16—Cl21120.1 (2)
C2—C3—O7110.8 (2)C12—C17—C16121.9 (3)
H3—C3—C4109.8C12—C17—H17119.1
H3—C3—O7109.8C16—C17—H17119.0
C4—C3—O7105.9 (2)C13—O18—C19119.8 (3)
C3—C4—H4108.9O18—C19—H19A109.5
C3—C4—C5111.0 (3)O18—C19—H19B109.5
C3—C4—N9108.0 (2)O18—C19—H19C109.5
H4—C4—C5108.9H19A—C19—H19B109.5
H4—C4—N9108.9H19A—C19—H19C109.5
C5—C4—N9111.2 (2)H19B—C19—H19C109.5
C4—C5—H5A109.3C15—N20—H20A120.0
C4—C5—H5B109.3C15—N20—H20B120.0
C4—C5—C6111.5 (3)H20A—N20—H20B120.0
H5A—C5—H5B108.0O22—C24—O23127.0 (3)
H5A—C5—C6109.3O22—C24—C25115.5 (3)
H5B—C5—C6109.3O23—C24—C25117.5 (3)
N1—C6—C5111.1 (3)C24—C25—H25108.5
N1—C6—H6A109.4C24—C25—O26109.5 (2)
N1—C6—H6B109.4C24—C25—C27110.8 (2)
C5—C6—H6A109.4H25—C25—O26108.5
C5—C6—H6B109.4H25—C25—C27108.5
H6A—C6—H6B108.0O26—C25—C27110.9 (3)
C3—O7—C8114.6 (3)C25—O26—H26109.5
O7—C8—H8A109.5C25—C27—H27108.3
O7—C8—H8B109.5C25—C27—O28108.9 (3)
O7—C8—H8C109.5C25—C27—C29109.1 (2)
H8A—C8—H8B109.5H27—C27—O28108.3
H8A—C8—H8C109.5H27—C27—C29108.3
H8B—C8—H8C109.5O28—C27—C29113.8 (2)
C4—N9—H9117.3C27—O28—H28109.5
C4—N9—C10125.4 (2)C27—C29—O30114.3 (2)
H9—N9—C10117.3C27—C29—O31120.0 (3)
N9—C10—O11122.0 (3)O30—C29—O31125.7 (3)
N9—C10—C12118.0 (2)C29—O30—H30109.5
O11—C10—C12120.0 (2)H32A—O32—H32B107.7
C10—C12—C13126.5 (2)
H1A—N1—C2—H2A176.9H9—N9—C10—O11175.6
H1A—N1—C2—H2B58.2H9—N9—C10—C124.4
H1A—N1—C2—C362.5N9—C10—C12—C1312.0 (4)
H1B—N1—C2—H2A59.2N9—C10—C12—C17169.8 (3)
H1B—N1—C2—H2B59.4O11—C10—C12—C13168.0 (3)
H1B—N1—C2—C3179.9O11—C10—C12—C1710.2 (4)
C6—N1—C2—H2A62.0C10—C12—C13—C14177.6 (3)
C6—N1—C2—H2B179.4C10—C12—C13—O182.3 (4)
C6—N1—C2—C358.7 (3)C17—C12—C13—C140.6 (4)
H1A—N1—C6—C564.9C17—C12—C13—O18179.5 (3)
H1A—N1—C6—H6A56.0C10—C12—C17—C16176.6 (3)
H1A—N1—C6—H6B174.1C10—C12—C17—H173.3
H1B—N1—C6—C5177.4C13—C12—C17—C161.7 (4)
H1B—N1—C6—H6A61.7C13—C12—C17—H17178.3
H1B—N1—C6—H6B56.5C12—C13—C14—H14179.4
C2—N1—C6—C556.3 (3)C12—C13—C14—C150.6 (5)
C2—N1—C6—H6A177.2O18—C13—C14—H140.7
C2—N1—C6—H6B64.7O18—C13—C14—C15179.3 (3)
N1—C2—C3—H3179.1C12—C13—O18—C19179.8 (3)
N1—C2—C3—C457.7 (3)C14—C13—O18—C190.3 (5)
N1—C2—C3—O759.5 (3)C13—C14—C15—C160.7 (5)
H2A—C2—C3—H358.5C13—C14—C15—N20179.9 (3)
H2A—C2—C3—C462.9H14—C14—C15—C16179.3
H2A—C2—C3—O7179.9H14—C14—C15—N200.1
H2B—C2—C3—H360.2C14—C15—C16—C170.4 (5)
H2B—C2—C3—C4178.4C14—C15—C16—Cl21178.9 (3)
H2B—C2—C3—O761.2N20—C15—C16—C17179.0 (3)
C2—C3—C4—H464.3N20—C15—C16—Cl210.5 (4)
C2—C3—C4—C555.5 (3)C14—C15—N20—H20A0.0
C2—C3—C4—N9177.6 (3)C14—C15—N20—H20B180.0
H3—C3—C4—H457.1C16—C15—N20—H20A179.4
H3—C3—C4—C5176.9C16—C15—N20—H20B0.6
H3—C3—C4—N961.0C15—C16—C17—C121.6 (5)
O7—C3—C4—H4175.5C15—C16—C17—H17178.4
O7—C3—C4—C564.7 (3)Cl21—C16—C17—C12179.9 (2)
O7—C3—C4—N957.4 (3)Cl21—C16—C17—H170.2
C2—C3—O7—C877.3 (4)C13—O18—C19—H19A176.4
H3—C3—O7—C844.1C13—O18—C19—H19B56.4
C4—C3—O7—C8162.6 (3)C13—O18—C19—H19C63.6
C3—C4—C5—H5A173.9O22—C24—C25—H25115.9
C3—C4—C5—H5B68.1O22—C24—C25—O262.4 (4)
C3—C4—C5—C652.9 (3)O22—C24—C25—C27125.1 (3)
H4—C4—C5—H5A54.1O23—C24—C25—H2562.9
H4—C4—C5—H5B172.1O23—C24—C25—O26178.8 (3)
H4—C4—C5—C666.9O23—C24—C25—C2756.1 (4)
N9—C4—C5—H5A65.8C24—C25—O26—H262.6
N9—C4—C5—H5B52.1H25—C25—O26—H26115.7
N9—C4—C5—C6173.1 (3)C27—C25—O26—H26125.3
C3—C4—N9—H936.7C24—C25—C27—H2756.2
C3—C4—N9—C10143.3 (3)C24—C25—C27—O2861.4 (3)
H4—C4—N9—H9154.7C24—C25—C27—C29173.9 (3)
H4—C4—N9—C1025.3H25—C25—C27—H2762.8
C5—C4—N9—H985.3H25—C25—C27—O28179.6
C5—C4—N9—C1094.7 (3)H25—C25—C27—C2954.9
C4—C5—C6—N153.0 (3)O26—C25—C27—H27178.1
C4—C5—C6—H6A173.9O26—C25—C27—O2860.5 (3)
C4—C5—C6—H6B67.9O26—C25—C27—C2964.2 (3)
H5A—C5—C6—N1174.0C25—C27—O28—H28164.0
H5A—C5—C6—H6A65.1H27—C27—O28—H2846.4
H5A—C5—C6—H6B53.1C29—C27—O28—H2874.2
H5B—C5—C6—N168.0C25—C27—C29—O30125.1 (3)
H5B—C5—C6—H6A52.9C25—C27—C29—O3155.8 (4)
H5B—C5—C6—H6B171.0H27—C27—C29—O30117.2
C3—O7—C8—H8A178.4H27—C27—C29—O3161.9
C3—O7—C8—H8B61.6O28—C27—C29—O303.3 (4)
C3—O7—C8—H8C58.4O28—C27—C29—O31177.6 (3)
C4—N9—C10—O114.3 (5)C27—C29—O30—H30176.7
C4—N9—C10—C12175.6 (3)O31—C29—O30—H302.3
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N9—H9···O180.861.972.643 (3)134
O26—H26···O220.822.032.545 (4)120
O28—H28···O110.821.972.776 (3)167
O32—H32A···O260.851.962.764 (5)158
N1—H1A···O11i0.902.212.953 (3)140
N1—H1B···O22ii0.901.862.728 (4)161
N20—H20A···O23iii0.862.162.955 (4)155
N20—H20B···O31iv0.862.412.970 (4)123
O30—H30···O23v0.821.722.535 (3)171
O32—H32B···O28vi0.852.343.107 (5)150
Symmetry codes: (i) x+1, y, z; (ii) x+2, y+1/2, z+1; (iii) x+1, y+1/2, z+2; (iv) x, y+1/2, z+2; (v) x1, y, z; (vi) x+1, y1/2, z+1.

Experimental details

Crystal data
Chemical formulaC14H21ClN3O3+·C4H5O6·H2O
Mr481.89
Crystal system, space groupMonoclinic, P21
Temperature (K)293
a, b, c (Å)7.6086 (4), 10.664 (1), 14.0482 (6)
β (°) 93.980 (6)
V3)1137.1 (1)
Z2
Radiation typeCu Kα
µ (mm1)2.01
Crystal size (mm)0.45 × 0.30 × 0.26
Data collection
DiffractometerSiemens P4 four-circle
diffractometer
Absorption correctionψ scan
(XEMP; Siemens, 1989)
Tmin, Tmax0.325, 0.593
No. of measured, independent and
observed [F2 > 2σ(F2)] reflections
2935, 2350, 2280
Rint0.033
(sin θ/λ)max1)0.606
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.037, 0.107, 1.06
No. of reflections2350
No. of parameters295
No. of restraints?
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.21, 0.26
Absolute structureFlack (1983), 220 Friedel pairs
Absolute structure parameter0.01 (2)

Computer programs: XSCANS (Siemens, 1996), XSCANS, SIR92 (Altomare et al., 1994), SHELXL97 (Sheldrick, 1997), DIAMOND (Bergerhoff, 1996), PARST (Nardelli, 1983), PLATON (Spek, 1998) and WinGX (Farrugia, 1999).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N9—H9···O180.861.972.643 (3)134
O26—H26···O220.822.032.545 (4)120
O28—H28···O110.821.972.776 (3)167
O32—H32A···O260.851.962.764 (5)158
N1—H1A···O11i0.902.212.953 (3)140
N1—H1B···O22ii0.901.862.728 (4)161
N20—H20A···O23iii0.862.162.955 (4)155
N20—H20B···O31iv0.862.412.970 (4)123
O30—H30···O23v0.821.722.535 (3)171
O32—H32B···O28vi0.852.343.107 (5)150
Symmetry codes: (i) x+1, y, z; (ii) x+2, y+1/2, z+1; (iii) x+1, y+1/2, z+2; (iv) x, y+1/2, z+2; (v) x1, y, z; (vi) x+1, y1/2, z+1.
 

Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds