Acta Crystallographica Section D

Biological Crystallography

Volume 61, Part 4 (April 2005)


research papers



Acta Cryst. (2005). D61, 458-464    [ doi:10.1107/S0907444905001617 ]

Likelihood-enhanced fast translation functions

A. J. McCoy, R. W. Grosse-Kunstleve, L. C. Storoni and R. J. Read

Abstract: This paper is a companion to a recent paper on fast rotation functions [Storoni et al. (2004), Acta Cryst. D60, 432-438], which showed how a Taylor-series expansion of the maximum-likelihood rotation function leads to improved likelihood-enhanced fast rotation functions. In a similar manner, it is shown here how linear and quadratic Taylor-series expansions and least-squares approximations of the maximum-likelihood translation function lead to likelihood-enhanced translation functions, which can be calculated by FFT and which are more sensitive to the correct translation than the traditional correlation-coefficient fast translation function. These likelihood-enhanced translation targets for molecular-replacement searches have been implemented in the program Phaser using the Computational Crystallography Toolbox (cctbx).

Keywords: molecular replacement; translation functions; LETF; Phaser; cctbx.

 bibliographic record in  format

  Find reference:   Volume   Page   
  Search:     From   to      Advanced search

Copyright © International Union of Crystallography
IUCr Webmaster