Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270109015418/gd3289sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270109015418/gd3289Isup2.hkl |
CCDC reference: 742222
Cu(NO3)2.3H2O (22 mg, 0.091 mmol) was dissolved in methanol (3 ml), followed by 1,2-diaminoethane (12 µl, 0.182 mmol) and dtdp (20 mg, 0.091 mmol). The solution was allowed to evaporate slowly to dryness at ambient temperature. Blue crystals of the title compound were formed, accompanied by a major component of violet crystals of trans-Cu(en)2(NO3)2 which were identified from the dimensions of the unit cell (Komiyama & Lingafelter, 1964; Manríquez et al., 1996).
H atoms attached to C or N atoms were treated as riding atoms in geometrically calculated positions, with C—H = 0.93–0.97 and N—H = 0.90 Å, and with Uiso(H) = 1.2Ueq(C,N). The water H atoms were located in difference maps and then refined subject to restraints, with Uiso(H) = 1.2Ueq(O), giving O—H distances in the range 0.82 (3)–0.85 (3)Å.
Data collection: XSCANS (Bruker, 1999); cell refinement: XSCANS (Bruker, 1999); data reduction: XSCANS (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2008); software used to prepare material for publication: enCIFer (Allen et al., 2004).
[Cu(NO3)(C2H4N2)(C10H8N2S2)(H2O)]NO3·H2O | F(000) = 1036 |
Mr = 504.00 | Dx = 1.720 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 8.5762 (11) Å | θ = 4.7–12.6° |
b = 21.844 (2) Å | µ = 1.39 mm−1 |
c = 11.092 (5) Å | T = 294 K |
β = 110.512 (17)° | Prism, blue |
V = 1946.2 (10) Å3 | 0.49 × 0.20 × 0.20 mm |
Z = 4 |
Siemens P4 four-circle diffractometer | 2847 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.036 |
Graphite monochromator | θmax = 25.0°, θmin = 2.2° |
ω scans | h = −1→10 |
Absorption correction: ψ scan ABSPsiScan in PLATON (Spek, 2009) | k = −1→25 |
Tmin = 0.543, Tmax = 0.761 | l = −13→12 |
4383 measured reflections | 3 standard reflections every 97 reflections |
3419 independent reflections | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0421P)2 + 1.0178P] where P = (Fo2 + 2Fc2)/3 |
3419 reflections | (Δ/σ)max = 0.001 |
274 parameters | Δρmax = 0.35 e Å−3 |
4 restraints | Δρmin = −0.28 e Å−3 |
[Cu(NO3)(C2H4N2)(C10H8N2S2)(H2O)]NO3·H2O | V = 1946.2 (10) Å3 |
Mr = 504.00 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.5762 (11) Å | µ = 1.39 mm−1 |
b = 21.844 (2) Å | T = 294 K |
c = 11.092 (5) Å | 0.49 × 0.20 × 0.20 mm |
β = 110.512 (17)° |
Siemens P4 four-circle diffractometer | 2847 reflections with I > 2σ(I) |
Absorption correction: ψ scan ABSPsiScan in PLATON (Spek, 2009) | Rint = 0.036 |
Tmin = 0.543, Tmax = 0.761 | 3 standard reflections every 97 reflections |
4383 measured reflections | intensity decay: none |
3419 independent reflections |
R[F2 > 2σ(F2)] = 0.034 | 4 restraints |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.35 e Å−3 |
3419 reflections | Δρmin = −0.28 e Å−3 |
274 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.24379 (4) | 0.461038 (14) | 0.24673 (3) | 0.02842 (12) | |
O3 | −0.0708 (3) | 0.45702 (10) | 0.1497 (2) | 0.0400 (5) | |
H3A | −0.132 (4) | 0.4806 (13) | 0.174 (3) | 0.048* | |
H3B | −0.111 (4) | 0.4241 (11) | 0.159 (3) | 0.048* | |
S14 | 0.40293 (8) | 0.27120 (3) | 0.73399 (6) | 0.03066 (17) | |
S24 | 0.19734 (9) | 0.26502 (3) | 0.78428 (6) | 0.03153 (17) | |
N11 | 0.2736 (3) | 0.39907 (9) | 0.3873 (2) | 0.0270 (5) | |
C12 | 0.1641 (3) | 0.39047 (12) | 0.4462 (3) | 0.0306 (6) | |
H12 | 0.0630 | 0.4111 | 0.4149 | 0.037* | |
C13 | 0.1928 (3) | 0.35245 (12) | 0.5517 (3) | 0.0311 (6) | |
H13 | 0.1126 | 0.3475 | 0.5896 | 0.037* | |
C14 | 0.3427 (3) | 0.32212 (11) | 0.5992 (2) | 0.0251 (5) | |
C15 | 0.4581 (3) | 0.32988 (12) | 0.5384 (2) | 0.0285 (6) | |
H15 | 0.5596 | 0.3094 | 0.5677 | 0.034* | |
C16 | 0.4196 (3) | 0.36847 (12) | 0.4340 (2) | 0.0295 (6) | |
H16 | 0.4973 | 0.3737 | 0.3938 | 0.035* | |
N21 | 0.2573 (3) | 0.39560 (10) | 1.1180 (2) | 0.0299 (5) | |
C22 | 0.1310 (3) | 0.35579 (12) | 1.0737 (3) | 0.0311 (6) | |
H22 | 0.0514 | 0.3549 | 1.1129 | 0.037* | |
C23 | 0.1129 (3) | 0.31611 (12) | 0.9730 (3) | 0.0294 (6) | |
H23 | 0.0227 | 0.2895 | 0.9447 | 0.035* | |
C24 | 0.2326 (3) | 0.31680 (11) | 0.9145 (2) | 0.0259 (5) | |
C25 | 0.3667 (4) | 0.35592 (13) | 0.9626 (3) | 0.0361 (6) | |
H25 | 0.4508 | 0.3564 | 0.9277 | 0.043* | |
C26 | 0.3740 (4) | 0.39432 (13) | 1.0632 (3) | 0.0372 (7) | |
H26 | 0.4645 | 0.4207 | 1.0946 | 0.045* | |
N1 | 0.2688 (3) | 0.52854 (10) | 0.1321 (2) | 0.0326 (5) | |
H1A | 0.3647 | 0.5237 | 0.1172 | 0.039* | |
H1B | 0.1842 | 0.5271 | 0.0560 | 0.039* | |
N2 | 0.2014 (3) | 0.52970 (10) | 0.3525 (2) | 0.0369 (6) | |
H2A | 0.1188 | 0.5194 | 0.3811 | 0.044* | |
H2B | 0.2937 | 0.5373 | 0.4210 | 0.044* | |
C1 | 0.2690 (4) | 0.58823 (13) | 0.1946 (3) | 0.0413 (7) | |
H1C | 0.2323 | 0.6202 | 0.1300 | 0.050* | |
H1D | 0.3808 | 0.5981 | 0.2518 | 0.050* | |
C2 | 0.1540 (4) | 0.58458 (13) | 0.2694 (3) | 0.0408 (7) | |
H2C | 0.1644 | 0.6210 | 0.3216 | 0.049* | |
H2D | 0.0396 | 0.5813 | 0.2113 | 0.049* | |
O31 | 0.5762 (3) | 0.48905 (11) | 0.3603 (2) | 0.0508 (6) | |
O32 | 0.6431 (3) | 0.51406 (11) | 0.1955 (2) | 0.0538 (6) | |
O33 | 0.8345 (3) | 0.49563 (11) | 0.3795 (2) | 0.0518 (6) | |
N31 | 0.6850 (3) | 0.49950 (11) | 0.3125 (2) | 0.0361 (6) | |
O41 | −0.2220 (3) | 0.25313 (11) | 0.2215 (2) | 0.0600 (7) | |
O42 | −0.2319 (4) | 0.29728 (14) | 0.0443 (3) | 0.0731 (8) | |
O43 | −0.1948 (4) | 0.35034 (13) | 0.2144 (3) | 0.0855 (9) | |
N41 | −0.2174 (3) | 0.29968 (14) | 0.1599 (3) | 0.0510 (7) | |
O4 | −0.2045 (4) | 0.33030 (16) | 0.4708 (3) | 0.0753 (8) | |
H4A | −0.200 (6) | 0.2944 (12) | 0.501 (4) | 0.090* | |
H4B | −0.205 (6) | 0.328 (2) | 0.395 (2) | 0.090* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0390 (2) | 0.02378 (18) | 0.02399 (19) | 0.00294 (13) | 0.01298 (14) | 0.00162 (12) |
O3 | 0.0429 (12) | 0.0413 (12) | 0.0388 (12) | 0.0027 (10) | 0.0179 (10) | −0.0029 (10) |
S14 | 0.0369 (4) | 0.0307 (4) | 0.0261 (3) | 0.0075 (3) | 0.0132 (3) | 0.0040 (3) |
S24 | 0.0413 (4) | 0.0287 (4) | 0.0279 (4) | −0.0051 (3) | 0.0164 (3) | −0.0029 (3) |
N11 | 0.0322 (12) | 0.0234 (11) | 0.0261 (11) | 0.0022 (9) | 0.0109 (9) | 0.0021 (9) |
C12 | 0.0293 (14) | 0.0314 (14) | 0.0313 (14) | 0.0062 (11) | 0.0110 (11) | 0.0041 (11) |
C13 | 0.0305 (14) | 0.0349 (15) | 0.0317 (14) | 0.0032 (12) | 0.0155 (12) | 0.0027 (12) |
C14 | 0.0308 (14) | 0.0204 (12) | 0.0237 (13) | 0.0003 (10) | 0.0089 (10) | −0.0019 (10) |
C15 | 0.0240 (13) | 0.0301 (14) | 0.0305 (14) | 0.0032 (11) | 0.0085 (11) | 0.0018 (11) |
C16 | 0.0306 (14) | 0.0303 (14) | 0.0318 (14) | −0.0011 (11) | 0.0162 (12) | 0.0012 (11) |
N21 | 0.0370 (13) | 0.0258 (11) | 0.0296 (12) | 0.0009 (10) | 0.0151 (10) | 0.0003 (9) |
C22 | 0.0344 (15) | 0.0296 (14) | 0.0348 (15) | 0.0024 (12) | 0.0190 (12) | 0.0003 (12) |
C23 | 0.0311 (14) | 0.0254 (13) | 0.0345 (15) | −0.0002 (11) | 0.0149 (12) | 0.0021 (11) |
C24 | 0.0341 (14) | 0.0213 (12) | 0.0219 (13) | 0.0034 (11) | 0.0094 (11) | 0.0017 (10) |
C25 | 0.0371 (16) | 0.0389 (16) | 0.0413 (16) | −0.0085 (13) | 0.0249 (13) | −0.0065 (13) |
C26 | 0.0362 (16) | 0.0384 (16) | 0.0411 (17) | −0.0109 (13) | 0.0187 (13) | −0.0080 (13) |
N1 | 0.0326 (12) | 0.0334 (13) | 0.0299 (12) | −0.0006 (10) | 0.0085 (10) | 0.0043 (10) |
N2 | 0.0486 (15) | 0.0322 (13) | 0.0290 (13) | 0.0042 (11) | 0.0124 (11) | −0.0014 (10) |
C1 | 0.0475 (18) | 0.0284 (15) | 0.0437 (18) | −0.0039 (13) | 0.0107 (14) | 0.0032 (13) |
C2 | 0.0504 (19) | 0.0259 (14) | 0.0437 (18) | 0.0034 (13) | 0.0133 (15) | −0.0015 (12) |
O31 | 0.0361 (12) | 0.0738 (16) | 0.0443 (13) | 0.0009 (11) | 0.0163 (10) | 0.0129 (11) |
O32 | 0.0575 (14) | 0.0644 (15) | 0.0432 (14) | 0.0040 (12) | 0.0220 (11) | 0.0124 (11) |
O33 | 0.0310 (12) | 0.0609 (15) | 0.0602 (15) | 0.0013 (10) | 0.0119 (11) | −0.0111 (12) |
N31 | 0.0342 (14) | 0.0340 (13) | 0.0402 (14) | −0.0012 (10) | 0.0132 (11) | −0.0009 (11) |
O41 | 0.0672 (17) | 0.0542 (15) | 0.0586 (16) | −0.0161 (12) | 0.0221 (13) | 0.0075 (12) |
O42 | 0.0804 (19) | 0.091 (2) | 0.0488 (16) | −0.0092 (16) | 0.0241 (14) | 0.0083 (14) |
O43 | 0.125 (3) | 0.0579 (18) | 0.083 (2) | −0.0290 (18) | 0.049 (2) | −0.0115 (16) |
N41 | 0.0369 (15) | 0.0604 (19) | 0.0558 (19) | −0.0148 (13) | 0.0163 (13) | −0.0016 (15) |
O4 | 0.0636 (18) | 0.101 (2) | 0.071 (2) | −0.0045 (17) | 0.0361 (16) | −0.0134 (18) |
Cu1—N1 | 2.007 (2) | C23—C24 | 1.394 (4) |
Cu1—N11 | 2.012 (2) | C23—H23 | 0.9300 |
Cu1—N2 | 2.014 (2) | C24—C25 | 1.381 (4) |
Cu1—N21i | 2.052 (2) | C25—C26 | 1.380 (4) |
Cu1—O3 | 2.532 (2) | C25—H25 | 0.9300 |
Cu1—O31 | 2.751 (2) | C26—H26 | 0.9300 |
O3—H3A | 0.84 (3) | N1—C1 | 1.477 (4) |
O3—H3B | 0.82 (3) | N1—H1A | 0.9000 |
S14—C14 | 1.788 (3) | N1—H1B | 0.9000 |
S14—S24 | 2.032 (1) | N2—C2 | 1.480 (4) |
S24—C24 | 1.775 (3) | N2—H2A | 0.9000 |
N11—C12 | 1.332 (3) | N2—H2B | 0.9000 |
N11—C16 | 1.352 (3) | C1—C2 | 1.497 (5) |
C12—C13 | 1.385 (4) | C1—H1C | 0.9700 |
C12—H12 | 0.9300 | C1—H1D | 0.9700 |
C13—C14 | 1.376 (4) | C2—H2C | 0.9700 |
C13—H13 | 0.9300 | C2—H2D | 0.9700 |
C14—C15 | 1.390 (4) | O31—N31 | 1.245 (3) |
C15—C16 | 1.376 (4) | O32—N31 | 1.260 (3) |
C15—H15 | 0.9300 | O33—N31 | 1.239 (3) |
C16—H16 | 0.9300 | O41—N41 | 1.233 (4) |
N21—C22 | 1.341 (4) | O42—N41 | 1.245 (4) |
N21—C26 | 1.341 (4) | O43—N41 | 1.243 (4) |
N21—Cu1ii | 2.052 (2) | O4—H4A | 0.85 (3) |
C22—C23 | 1.379 (4) | O4—H4B | 0.84 (3) |
C22—H22 | 0.9300 | ||
N1—Cu1—N11 | 166.48 (9) | C22—C23—C24 | 118.6 (2) |
N1—Cu1—N2 | 84.45 (10) | C22—C23—H23 | 120.7 |
N11—Cu1—N2 | 92.84 (9) | C24—C23—H23 | 120.7 |
N1—Cu1—N21i | 91.49 (10) | C25—C24—C23 | 118.5 (2) |
N11—Cu1—N21i | 92.74 (9) | C25—C24—S24 | 126.2 (2) |
N2—Cu1—N21i | 171.75 (9) | C23—C24—S24 | 115.4 (2) |
N1—Cu1—O3 | 95.21 (9) | C26—C25—C24 | 118.9 (2) |
N11—Cu1—O3 | 97.66 (8) | C26—C25—H25 | 120.5 |
N2—Cu1—O3 | 83.71 (9) | C24—C25—H25 | 120.5 |
N21i—Cu1—O3 | 89.51 (8) | N21—C26—C25 | 123.4 (3) |
N1—Cu1—O31 | 78.64 (8) | N21—C26—H26 | 118.3 |
N11—Cu1—O31 | 87.99 (8) | C25—C26—H26 | 118.3 |
N2—Cu1—O31 | 86.41 (9) | C1—N1—Cu1 | 109.49 (18) |
N21i—Cu1—O31 | 99.87 (8) | C1—N1—H1A | 109.8 |
O3—Cu1—O31 | 168.84 (7) | Cu1—N1—H1A | 109.8 |
Cu1—O3—H3A | 122 (2) | C1—N1—H1B | 109.8 |
Cu1—O3—H3B | 114 (2) | Cu1—N1—H1B | 109.8 |
H3A—O3—H3B | 99 (3) | H1A—N1—H1B | 108.2 |
C14—S14—S24 | 104.29 (9) | C2—N2—Cu1 | 107.86 (18) |
C24—S24—S14 | 105.31 (9) | C2—N2—H2A | 110.1 |
C12—N11—C16 | 117.3 (2) | Cu1—N2—H2A | 110.1 |
C12—N11—Cu1 | 123.72 (18) | C2—N2—H2B | 110.1 |
C16—N11—Cu1 | 118.61 (17) | Cu1—N2—H2B | 110.1 |
N11—C12—C13 | 123.5 (2) | H2A—N2—H2B | 108.4 |
N11—C12—H12 | 118.2 | N1—C1—C2 | 108.7 (2) |
C13—C12—H12 | 118.2 | N1—C1—H1C | 109.9 |
C14—C13—C12 | 118.5 (2) | C2—C1—H1C | 109.9 |
C14—C13—H13 | 120.7 | N1—C1—H1D | 109.9 |
C12—C13—H13 | 120.7 | C2—C1—H1D | 109.9 |
C13—C14—C15 | 119.0 (2) | H1C—C1—H1D | 108.3 |
C13—C14—S14 | 125.2 (2) | N2—C2—C1 | 107.3 (2) |
C15—C14—S14 | 115.82 (19) | N2—C2—H2C | 110.2 |
C16—C15—C14 | 118.8 (2) | C1—C2—H2C | 110.2 |
C16—C15—H15 | 120.6 | N2—C2—H2D | 110.2 |
C14—C15—H15 | 120.6 | C1—C2—H2D | 110.2 |
N11—C16—C15 | 122.9 (2) | H2C—C2—H2D | 108.5 |
N11—C16—H16 | 118.6 | N31—O31—Cu1 | 131.06 (18) |
C15—C16—H16 | 118.6 | O33—N31—O31 | 120.3 (3) |
C22—N21—C26 | 117.1 (2) | O33—N31—O32 | 119.8 (3) |
C22—N21—Cu1ii | 118.13 (18) | O31—N31—O32 | 119.9 (2) |
C26—N21—Cu1ii | 124.27 (19) | O41—N41—O43 | 119.6 (3) |
N21—C22—C23 | 123.5 (2) | O41—N41—O42 | 121.6 (3) |
N21—C22—H22 | 118.3 | O43—N41—O42 | 118.7 (3) |
C23—C22—H22 | 118.3 | H4A—O4—H4B | 108 (5) |
C14—S14—S24—C24 | −98.35 (12) | N1—C1—C2—N2 | 51.4 (3) |
Symmetry codes: (i) x, y, z−1; (ii) x, y, z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O32 | 0.90 | 2.25 | 3.052 (4) | 149 |
N1—H1B···O3iii | 0.90 | 2.17 | 3.006 (3) | 154 |
N2—H2B···O31iv | 0.90 | 2.36 | 3.114 (3) | 141 |
N2—H2A···O33iv | 0.90 | 2.56 | 3.143 (4) | 123 |
N2—H2A···O33v | 0.90 | 2.49 | 3.347 (4) | 160 |
O3—H3A···O32v | 0.84 (3) | 2.15 (4) | 2.950 (4) | 158 (3) |
O3—H3A···O33v | 0.84 (3) | 2.42 (3) | 3.053 (4) | 133 (3) |
O3—H3B···O43 | 0.82 (3) | 1.95 (3) | 2.759 (4) | 169 (3) |
O4—H4A···O42vi | 0.85 (3) | 2.10 (3) | 2.936 (5) | 169 (5) |
O4—H4B···O43 | 0.84 (3) | 2.09 (3) | 2.907 (5) | 163 (4) |
Symmetry codes: (iii) −x, −y+1, −z; (iv) −x+1, −y+1, −z+1; (v) x−1, y, z; (vi) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Cu(NO3)(C2H4N2)(C10H8N2S2)(H2O)]NO3·H2O |
Mr | 504.00 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 8.5762 (11), 21.844 (2), 11.092 (5) |
β (°) | 110.512 (17) |
V (Å3) | 1946.2 (10) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.39 |
Crystal size (mm) | 0.49 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Siemens P4 four-circle diffractometer |
Absorption correction | ψ scan ABSPsiScan in PLATON (Spek, 2009) |
Tmin, Tmax | 0.543, 0.761 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4383, 3419, 2847 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.088, 1.03 |
No. of reflections | 3419 |
No. of parameters | 274 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.35, −0.28 |
Computer programs: XSCANS (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2008), enCIFer (Allen et al., 2004).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O32 | 0.90 | 2.25 | 3.052 (4) | 149 |
N1—H1B···O3i | 0.90 | 2.17 | 3.006 (3) | 154 |
N2—H2B···O31ii | 0.90 | 2.36 | 3.114 (3) | 141 |
N2—H2A···O33ii | 0.90 | 2.56 | 3.143 (4) | 123 |
N2—H2A···O33iii | 0.90 | 2.49 | 3.347 (4) | 160 |
O3—H3A···O32iii | 0.84 (3) | 2.15 (4) | 2.950 (4) | 158 (3) |
O3—H3A···O33iii | 0.84 (3) | 2.42 (3) | 3.053 (4) | 133 (3) |
O3—H3B···O43 | 0.82 (3) | 1.95 (3) | 2.759 (4) | 169 (3) |
O4—H4A···O42iv | 0.85 (3) | 2.10 (3) | 2.936 (5) | 169 (5) |
O4—H4B···O43 | 0.84 (3) | 2.09 (3) | 2.907 (5) | 163 (4) |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y+1, −z+1; (iii) x−1, y, z; (iv) x, −y+1/2, z+1/2. |
Since Fujita's pioneering work on the molecular square with M4L4 topology, derived from Pd(en)(NO3)2 (en is 1,2-diaminoethane) and 4,4'-bipyridine (Fujita et al., 1990), 1,2-diaminoethane has frequently been used to protect cis-coordination sites at Pd2+ and Pt2+ metal corners in discrete two- and three-dimensional metallosupramolecular assemblies, in particular with pyridine-based monodentate ligands (Fujita, 1998; Navarro & Lippert, 2001; Fujita et al. 2005; Fujita & Yoshizawa, 2008). Not surprisingly, a related chemistry based on 1,2-diaminoethane complexes of divalent metal ions from the first transition metal row is much less developed with respect to the lability of these metal ions. Two coordination polymers based on Cu(en)2+ and 4,4'-bipyridine were reported by Chawla et al. (2001), but the solid-state structures were not determined. To the best of our knowledge the title compound, {[Cu(en)(µ2-dtdp)(NO3)(H2O)]NO3.H2O}n, (I) (dtdp is 4,4'-dithiodipyridine), is the first structurally studied coordination polymer comprising Cu(en)2+ units and a bridging ligand of the 4,4'-bipyridine type. The dtdp ligand has, inevitably, an ideal 90° bent structure and exhibits axial chirality. Because the barrier of rotation is relatively low, it exists as an equilibrium mixture of both enantiomeric conformers in solution (Kessler & Rundel, 1968).
The dtdp ligand has frequently been used in metallosupramolecular assemblies. A wide variety of coordination polymers are known in the literature, including double chains (Kondo et al., 2000; Luo et al., 2003; Horikoshi & Mikuriya, 2005a; Suen et al., 2005; Manna et al.,2005; Gosh et al., 2006; Suen & Wang, 2006; Carballo et al., 2007), zigzag chains (Horikoshi et al., 2001, 2002, 2005; Ng et al., 2004; Horikoshi & Mikuriya, 2005b), helices (Tabellion et al., 2001; Horikoshi et al., 2001, 2002), arched chains (Lai & Tiekink, 2004; Carballo et al., 2006; Manna et al., 2007) and two-dimensional networks (Luo et al., 2003). Achiral (Tabellion et al., 2001) and chiral (Yu et al., 2002; Horikoshi et al., 2005) metallamacrocycles with M2L2 topology have also been reported. The coordination chemistry of the dtdp ligand was reviewed by Horikoshi & Mochida (2006). Essentially, three different products of self-assembly can be expected from the 1:1 combination of µ2-bridging dtdp and cis-configured square-planar or octahedrally coordinated metal ions, namely infinite chiral helices or arched chains and discrete M2L2 metallamacrocycles (Fig. 1).
Compound (I) crystallizes in the monoclinic space group P21/c with all atoms on general positions, and exhibits the arched chain motif as depicted in Fig. 1(c). A diagram of the repeat unit is shown in Fig. 2. The coordination polymer is generated by translational symmetry in the [001] direction (Fig. 3), with a period corresponding to the crystallographic c axis [11.092 (5) Å]. In each polymeric chain there is only one crystallographically independent Cu2+ ion. The dtdp ligand connects the Cu2+ ions in a µ2-bridging mode. The coordination environment about the Cu2+ ion is essentially an elongated octahedron with some deviations of the angles. Two equatorial cis coordination sites are occupied by 1,2-diaminoethane. The two remaining equatorial cis sites are occupied by pyridine moieties of dtdp. The coordination geometry parameters about the Cu2+ ion and the equatorial N donors exhibit typical values. A water molecule is in an axial position, with a Cu1—O3 distance of 2.532 (2) Å. The coordination environment is completed by a weaker κO-bonded NO3- anion with a considerably longer bond length of 2.751 (2) Å. In contrast, in trans-Cu(en)2(NO3)2 this distance is 2.566 (4) Å (Manríquez et al., 1996). A known example for Cu2+ with trans-configured H2O and NO3- in an equatorial four N-ligand donor set is Cu(dien)(nic)(NO3-)(H2O) [dien is bis(2-aminoethyl)amine and nic is 3-pyridinecarboxylate; Palicová et al., 2008]. Interestingly, in this complex the bonding situation of the axial ligands is quite different from that observed in (I); the Cu—O distances are 2.716 (2) and 2,457 (2) Å for H2O and NO3-, respectively. The molecular geometry parameters of the dtdp ligand in (I) are within the expected ranges [Standard reference?]. The S—S bond length is 2.032 (1) Å. The C—S—S—C torsion angle is considerably larger than the ideal value of 90°, at 98.4 (1)°.
The coordinated NO3- anion accepts an intrachain hydrogen bond from an amino group of the 1,2-diaminoethane ligand with a graph-set motif of S(6) (Bernstein et al., 1995). The asymmetric unit comprises a non-coordinating NO3- anion and a co-crystallized water molecule. The crystal packing is achieved via hydrogen bonds of N—H···O and O—H···O types (Table 1), which link the coordination polymer chains into a three-dimensional framework structure, in which adjacent chains form a centrosymmetric R22(8) motif by means of N—H···O hydrogen-bonding interactions between atoms N1 and O3.
The polymeric chains in compound (I)are composed of only one enantiomeric conformer of the dtdp ligand and the Cu(en)2+ unit, respectively. The right-handed P form of dtdp forms a chain with the right-handed δ conformer of the Cu(en)2+ unit and vice versa. Thus, the chains exhibit chirality, although the crystal structure contains both enantiomeric forms with respect to the centrosymmetric space group. The compact arrangement is achieved by the interlocking of chains of opposite chirality.
It is notable that compound (I) was obtained from a mixture which contained Cu2+, 1,2-diaminoethane and dtdp in 1:2:1 molar ratio. This means that Cu(en)22+ was the precursor in solution from which the title coordination polymer has self-assembled. Indeed, the major product in the crystallization vessel was trans-Cu(en)2(NO3)2. Attempts to allow the components to react in a 1:1:1 molar ratio under the same conditions led immediately to a light-blue powder, the elemental analysis and powder X-ray diffraction analysis of which were not consistent with the calculated ones for the structure of (I).
In summary, this work has shown that the Cu(en)2+ unit can be principally functionalized as a cis metal corner in metallosupramolecular chemistry, although its reactivity is difficult to control.