Journal of Synchrotron Radiation

Volume 10, Part 1 (January 2003)

research papers

J. Synchrotron Rad. (2003). 10, 64-68 [ doi:10.1107/S0909049502017296 ]

Simulating the XANES of metalloenzymes - a case study

A. Mijovilovich and W. Meyer-Klaucke

Abstract: The analysis of XANES patterns is very indicative for screening samples. Powerful X-ray absorption spectroscopy data-analysis programs can simulate these patterns. Here, a case study on two structural motifs is presented: a non-heme Fe site (2-His-1-carboxylate motif) and the metallo [beta] -lactamase dinuclear Zn site. Simulations of the edge shapes for different structural models will be compared with experimental results, pointing out limitations and challenges. The influence of single neighbouring atoms in the first and second shell on the resulting XANES pattern is discussed. Insights into catalytic mechanisms and the requirements for future theory development are addressed.

Keywords: XANES; simulation; enzyme; X-ray absorption spectroscopy (XAS).